Desulfosporosinus orientis: Desor_0719
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Entry
Desor_0719 CDS
T01675
Name
(GenBank) putative domain HDIG-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dor
Desulfosporosinus orientis
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dor03019
]
Desor_0719
Messenger RNA biogenesis [BR:
dor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Desor_0719
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GFIT
Motif
Pfam:
HD
HDOD
tRNA_anti-codon
Cas3_HD
HD-CE
DUF905
Motif
Other DBs
NCBI-ProteinID:
AET66408
UniProt:
G7W7Y2
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All DBs
Position
725359..726288
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AA seq
309 aa
AA seq
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MLKECKAGERFEGILLINEWKEVPFRQKPGSYITLTCQDRSGTIQGKIWNYEPQVLVWLN
EQDVFYVKGMISEYRGTLDLTVETIRLVPKEEVDLTELLPSSPVDLEVLERRLDLLIKKI
FQPELRVLLEQFFKHPEKGDTYRRAPAAIKIHQAYLRGLWEHSLRVAEIAEGIARLYPGI
DYDLVVAGALLHDVGKIREYAYDRGIKFTTDGRLLGHIILGIELLTEEIASIPDFPNELR
SKLLHILASHHGKYEWQSPKKPKLMEALVIHYADALDAELWQFEQAKENYPNDDWSPYIP
NMERYFYLK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaagaatgtaaagccggggaacgatttgaagggatactgttaattaatgagtgg
aaagaggttcctttccgtcaaaaacccggttcatatataaccttaacctgtcaggatcgg
tcgggaacgattcaagggaagatttggaattatgagccccaagttctggtttggttaaac
gaacaagacgttttttatgttaaagggatgatttccgaatatcgtggtaccctggacctt
accgttgagaccattcgcttagtaccaaaagaagaggtggatttaaccgaacttcttccc
agctccccggtagatttagaggtgctggaacgaaggcttgatcttctaatcaaaaaaatt
ttccagccggaactgagagttctgctggagcagttctttaaacatcccgaaaaaggggac
acttataggagggcccctgcagctataaaaattcatcaagcttatctgcgcggactctgg
gagcatagtctgagagttgctgaaatagcagagggaatagccaggctttatcctggtata
gactatgacttagttgtagcaggagcgcttttgcatgatgtgggcaagattcgtgagtac
gcctatgacagaggaattaagttcactactgatggaaggctgctgggtcatatcattcta
ggaattgaactattaactgaggagattgccagtataccggatttccccaatgagcttcgc
tctaaattattgcacattcttgccagtcatcacggtaaatacgaatggcaatcccctaaa
aaaccaaagctgatggaagcgttagtcattcactacgctgatgccctggatgcagagctt
tggcaatttgagcaggctaaagaaaactatcccaatgatgattggtcaccttatattcca
aatatggagcgttatttctacctgaaatag
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