Desulfosporosinus orientis: Desor_2041
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Entry
Desor_2041 CDS
T01675
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dor
Desulfosporosinus orientis
Pathway
dor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desor_2041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dor03400
]
Desor_2041
Enzymes [BR:
dor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Desor_2041
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Desor_2041
DNA repair and recombination proteins [BR:
dor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desor_2041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zf_2nd_IFT121
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AET67650
UniProt:
G7WF39
LinkDB
All DBs
Position
2153952..2154821
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AA seq
289 aa
AA seq
DB search
MPEIPEMEIYEHYLNQLVKNKKISRVNVLRLKSINLESTVFSSQVMNKQITGIERQGKFL
IFHLDDDNYLLTHMMLDGRLFYITNEDINQSMVMQSSAEDLKEMIKDLPGKPSVVFGLDD
GSTLFFCNLTLGYLYYLGKDELEKKLQELGRDPLDPSFQAQEFAQLLEGKRGKIKPWLMN
PRNISGVGNAYSNEALFQAGILPTRVISAISVEEKQALFRSLVEIINESIRLGGDMEEPF
ADWDDFTGGYNAHFKVYAREGVPCVNCREPIQKSEVGGRNSYFCPLCQK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaaattcctgaaatggagatctatgagcattacttgaatcaattggtaaaaaac
aaaaaaatttccagggttaatgttttacgtttaaaaagcattaaccttgaaagtaccgta
ttttcctcgcaagtaatgaataagcagataacggggattgaacgtcagggcaaattcctt
atctttcatcttgatgatgataactatctattgacccatatgatgctggatggcaggctt
ttttatattactaatgaggatattaaccaatccatggtaatgcagagcagtgctgaagat
ctaaaagaaatgattaaggatttgccgggaaagccaagtgttgtatttggattagacgat
ggttcaacactatttttttgtaatctaaccttaggctatttatattacctgggcaaagat
gaacttgagaaaaagcttcaggaattagggagagatcccctggacccatcttttcaagct
caggaatttgctcaattacttgagggaaaacgcgggaaaattaaaccctggctaatgaat
cccagaaatatttccggagtcggcaatgcttattcaaatgaagcactgtttcaagcgggg
attttaccaacaagagtcatttccgcaataagtgttgaagaaaagcaggcccttttccgc
tctttagtggaaattattaacgaatctatacgtcttggcggagatatggaggagccattt
gcagactgggacgactttaccggaggatacaatgcccattttaaagtgtacgcgagggaa
ggagtcccctgcgtcaactgccgggagcccattcagaaatccgaagttggggggagaaac
tcctatttctgccctctatgtcagaagtaa
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