Desulfosporosinus orientis: Desor_3556
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Entry
Desor_3556 CDS
T01675
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dor
Desulfosporosinus orientis
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dor03016
]
Desor_3556
Enzymes [BR:
dor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Desor_3556
Transfer RNA biogenesis [BR:
dor03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Desor_3556
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
AET69038
UniProt:
G7WIG4
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All DBs
Position
complement(3669816..3670376)
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AA seq
186 aa
AA seq
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MRLFIGIDLSYELKQALREFQTELKGLGLGGSYKSEDNFHITLEFLGELDKSNIPTLTET
LANAASKFKPFELTVGGLGAFPSFRRAHTLWTAVNGSLQELNRLRNDLHLDLKNKGFRLE
ERQFKPHITLVSRPNFDKIDLSVVQNKKLGYFQVEEIVLFESNVVNGKRAYLSMFSAGLQ
QPSVSG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtttattggcattgatttgagttatgaacttaaacaagcattacgtgaattc
cagacggaactgaaaggtctgggacttggcgggtcttacaaatcagaagacaattttcat
ataaccttagaatttttaggagagttggataagagcaatatacccacccttacagaaaca
ctggctaatgcagcaagtaagttcaagccctttgagttaaccgtcggcggtttgggggcg
tttccttcttttcggcgggctcatactttatggacagcggttaacggaagcctccaggaa
ttaaacagactgagaaatgatttacatcttgatcttaaaaacaaggggttcaggttggag
gaacgtcaatttaaaccccatataaccctggtttcgcggccaaactttgataagatcgat
ctttcggttgttcagaataaaaaacttggttatttccaagttgaggagattgttctcttt
gaaagtaatgtagtgaacggcaaaagagcttacctaagtatgtttagtgccggtttacag
cagccttccgtttctggataa
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