Desulfosporosinus orientis: Desor_4336
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Entry
Desor_4336 CDS
T01675
Name
(GenBank) PAS domain S-box
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dor
Desulfosporosinus orientis
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dor03000
]
Desor_4336
Transcription factors [BR:
dor03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desor_4336
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PocR
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS_9
PAS_4
PAS
Mg_chelatase
AAA_2
AAA_5
AAA
PAS_8
HTH_30
AAA_3
AAA_16
bpMoxR
PAS_7
HTH_7
AAA_19
MCM
Motif
Other DBs
NCBI-ProteinID:
AET69764
UniProt:
G7WJA5
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Position
complement(4492305..4494179)
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AA seq
624 aa
AA seq
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MDFNRKDVNLLDVIDLEFLQQFQDTFARVTGVAVLTLDKDNNPVTQPINFIDICMKYNRS
CSEGLKRCEISDKRGAEESTRTGKPAVYHCENGMMDFAAPIMLNGVRIGAILGGQVLAKQ
PEKEKYIKHAEVLGVNPHEYLEALNKVQVIPEERIREAANLLYLVSSKISKMIENQLRKE
ELQEEKNQAYKLLAAATSSVTEGLMAVDNDGKIIHINPAAHAIMGLSDKNIVGKPLSLIL
GPNNKFSEIARNGLWNTDEEIVLDQGGESIHCTSSSRPILKENGTIAGVVFTLREMRKVR
RLVNRMVGATARFTCEDIIGESVGMKKAFKLISVAANSLSNVLLTGESGTGKELFAQAIH
NHSGRSEGPFVAVNCAALPRELIQSELFGYNEGAFTGAKRGGNPGKFELANEGTIFLDEI
GDMPMELQVNLLRVLQERKVTRVGGEKVIPVNVRIIAATNKDLMKAVEEGRFREDLYYRL
NVLNIHIPPLRERGKDIELLTIHLINIFAEHLGKDINGAELEFFEIIRNYSWPGNVRELQ
NTVEYAMNVAEGEYLSVTDLPRSIHRQPDFLKEVGKVISLTEIERITVESTLKRFDGNIT
KTAKALGIGRNTLYDKLKKLRVRA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggattttaacaggaaggacgttaatttactggatgttattgacttagaatttttgcag
cagtttcaggacacttttgctcgtgtgacaggtgttgctgttttaactttagataaggat
aacaacccggtgactcagccgataaattttattgatatatgtatgaaatataatcgaagc
tgctctgaaggtttaaaacgttgtgaaataagtgataagagaggcgctgaagaatcaact
agaaccggaaagcctgcggtatatcattgtgaaaatggcatgatggattttgccgctccc
ataatgcttaacggcgtacgaatcggagcaatcctgggtggacaggtcttggcaaagcag
ccggaaaaggaaaaatatataaagcacgctgaagtgctgggcgtaaatccccatgaatac
ttagaagctttaaataaagtccaagttattccggaagaaagaataagggaagcagctaat
ttgctttatttggtgagttcaaaaatttctaaaatgatcgaaaaccagttgcgtaaggaa
gaacttcaagaggaaaaaaaccaggcctacaaattgttggctgctgcgaccagcagcgtt
acggaaggcctgatggctgtggacaacgatggtaagatcattcatattaatccagcggct
catgccattatgggattgtcggataaaaatatcgttggtaaaccattgagtttgattctt
ggtcccaacaataagtttagtgaaatagccagaaacggcctctggaacactgatgaagaa
attgtcctggatcagggtggggagagcattcattgtacaagttcttcccggccgatcttg
aaagaaaacggtacaatcgccggtgtagtgtttacgttgcgggaaatgagaaaggtgcgc
aggttagtcaacagaatggtaggggcaactgcccgctttacctgtgaagatattattggg
gaaagtgtgggaatgaagaaggcttttaagttgatctcggttgcggctaattccctttct
aatgtcttacttacaggtgaaagcggaacgggtaaagagctgtttgcccaagcgatccac
aatcatagcggccgttcggaggggccgtttgtcgcggtcaattgtgcagctctgccgcgt
gaactcattcaaagtgaactatttggttataatgagggtgcttttaccggggctaaacgg
ggaggcaatcccggtaagtttgagctggccaatgaggggaccatctttctggatgaaatc
ggggatatgcccatggaattgcaggtcaaccttttgcgggttttacaggagcggaaagta
accagagttggcggagaaaaggtgattcctgttaacgtccggattattgcagcgaccaac
aaggatctgatgaaggccgtcgaagaagggcgtttccgagaagatttgtattaccgcttg
aatgtcttaaatattcatatcccgcccttaagagagagagggaaagatattgaactctta
actattcatttaataaacatttttgctgaacacttgggtaaggatattaatggagctgag
ctggaatttttcgagattattcgtaattattcctggcccggaaatgtaagagaattacaa
aacacggtggaatatgccatgaatgtggcggagggtgaatatctcagcgttacggattta
ccccgcagcatacatcggcagccggactttttgaaggaagtggggaaagtcatctcctta
acagaaatagagcgaattactgttgagtcaacgttaaaacgctttgacggcaatattacc
aaaacggccaaagctttaggaattggacgcaataccttatatgataagttgaagaagttg
agggttagagcctag
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