Desulfosporosinus orientis: Desor_4655
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Entry
Desor_4655 CDS
T01675
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dor
Desulfosporosinus orientis
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dor03032
]
Desor_4655
03400 DNA repair and recombination proteins [BR:
dor03400
]
Desor_4655
Enzymes [BR:
dor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Desor_4655
DNA replication proteins [BR:
dor03032
]
Prokaryotic type
DNA Topoisomerases
Desor_4655
DNA repair and recombination proteins [BR:
dor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Desor_4655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Ogr_Delta
Zn_ribbon_recom
NusA_N
HVO_2753_ZBP
Toprim_4
PBDC1
Motif
Other DBs
NCBI-ProteinID:
AET70059
UniProt:
G7WE83
LinkDB
All DBs
Position
complement(4847229..4849322)
Genome browser
AA seq
697 aa
AA seq
DB search
MSKTLVIVESPAKAKSISKFLGSRYTVKASMGHLRDLPKSQMGVDLENDFEPKYIAIRGR
GDLIKELRAAAKSADRVFLASDPDREGEAIAWHLSYLLGLEQTDKIRIEFHEITKQAIQT
AIKHSRHIDQDRVDAQQARRVLDRLVGYQLSPLLWRKIKKGLSAGRVQSVAVRLIDDREE
EIRAFVSEEYWSLTAELQFAGGKFLAKLVKKSGKKISISNRTEMETVLEELKGKEFKVSD
VRTKEKKRLPAPPFTTSSLQQEAHRKLGFSPKRTMMLAQQLYEGLDLGKEGTVGLITYMR
TDSVKIADIAQTEAKEWILGNYGGDYYPPEPRQFTTKGRAQEAHEAIRPTLPLRTPDALK
GILSRDQLRLYRLIWERFMASQMSVAVVDTLTVESLVDEYLFRANASTVRFPGFLAIYEE
GNDDTEAKDEEQNSLTISVSPGEQLKLIKLQEKQHFTEPPPRYTEASLVRKMEEEGIGRP
STYAPTIETIQTRGYVVKEEKQLLLTELGDIVITLLKEHFPDIVNLEFTANLEEKLDLIE
EGKAPWKAVVEEYYQPFSVTLAEAEEKIGKVKIEDQVSEEICENCGRNMVIKMGRYGKFL
ACPGFPECRNTKPLFEEVGTPCPNCSKPLVVRRSKKGRKFYGCLGYPECDFVSWEMPAPE
PCPECGQLMVVKSTKRQKKHVCTNRECRHTIVIEEEG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaacgcttgtaattgttgagtctccagctaaagcaaaatccatcagcaaattt
ttaggaagccggtatacggttaaagcctcgatggggcatttgcgtgacttgcccaaaagt
caaatgggggtcgatttagaaaatgattttgaaccgaaatatattgctattcgcggacgg
ggagatttgattaaggaattacgcgctgcagctaaaagtgcagaccgggtattcttagcc
tcagaccctgatcgcgagggagaagctattgcctggcatttatcatatctgttagggctt
gaacagacggataaaattaggatcgagtttcatgagattaccaaacaggctatccaaacg
gccatcaagcattcccgccatatcgaccaggatcgggtggatgctcagcaagcccgccgg
gttttagatcgtttagttggctatcaattaagccccctgctgtggaggaagatcaaaaag
ggcctaagtgccggccgggttcaatccgttgccgttcgtctcattgatgaccgggaagag
gagatacgggcctttgtttctgaagaatactggagtctaacggcagaacttcaatttgcc
ggcggtaagtttctggcaaagctcgttaaaaagtccggcaaaaagatctctatttccaac
cgaacagaaatggagaccgtcttagaggagttaaaaggcaaagaattcaaagtcagcgat
gttcgtaccaaagaaaagaaaaggctccctgcgcctccctttaccaccagcagtttgcag
caggaagctcaccgcaaactggggttttcccctaagaggacaatgatgctggctcagcag
ctttatgaagggctggatttgggcaaagaaggtaccgttggtttgattacatatatgcgc
acagattctgtgaagattgctgatattgcccaaactgaggctaaggaatggattctcgga
aactatggcggggattactatccgccggaacctcggcagttcaccaccaagggcagagcg
caagaggctcatgaagctattcgccccaccttgcccctgcgcacgccggatgccttaaaa
ggaatcttgtcgagagatcagctgcgcttataccgtttaatttgggaacgttttatggct
agtcagatgagtgttgccgttgtagataccttgaccgttgaatcccttgttgatgagtat
ctcttccgggccaatgcttctaccgtccgctttccggggttcttggcgatatatgaagaa
ggaaatgatgatacggaagcgaaggatgaagagcagaattcattgacaatatccgtgtct
cccggtgaacagcttaaactgattaaacttcaggaaaaacaacattttaccgaaccccct
ccgcgctacactgaggcctctcttgtgcgcaagatggaagaggaaggtatcggcagaccg
agtacctatgcgccgactattgaaaccattcaaacaagagggtatgtggtcaaagaagaa
aagcagctcctgcttacggaactgggagatatcgtcattaccctgcttaaggaacatttc
ccggatattgtaaatttggagttcacagccaatttggaagaaaagctggaccttattgaa
gagggaaaagctccctggaaagctgtggtcgaagaatattaccagccgttttccgtgacc
ttggctgaggctgaagaaaaaatcggcaaagttaaaattgaggatcaggtttcggaggaa
atatgtgagaactgcggccggaatatggtcatcaaaatgggtcgctatggtaaattctta
gcatgcccgggctttccagaatgccgcaataccaaacctctctttgaagaagtaggtacc
ccttgtcctaattgttctaaacctctggtggtccgccgctctaagaaagggcgaaagttt
tatggctgcttaggttatccggagtgtgattttgtttcttgggaaatgccggcaccggag
ccttgtccggagtgtgggcaattgatggtggttaagtccaccaaacgccagaagaagcat
gtatgcactaaccgggaatgccgtcacactatcgtgattgaggaagaaggttaa
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