Desulfosporosinus orientis: Desor_5304
Help
Entry
Desor_5304 CDS
T01675
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dor
Desulfosporosinus orientis
Pathway
dor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desor_5304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dor03019
]
Desor_5304
03009 Ribosome biogenesis [BR:
dor03009
]
Desor_5304
Enzymes [BR:
dor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Desor_5304
Messenger RNA biogenesis [BR:
dor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Desor_5304
Ribosome biogenesis [BR:
dor03009
]
Prokaryotic type
rRNA helicases
Desor_5304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
NAT10_TcmA_helicase
WIT1_2_N
DD_DDX21-DDX50
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AET70683
UniProt:
G7WC65
LinkDB
All DBs
Position
complement(5506856..5508358)
Genome browser
AA seq
500 aa
AA seq
DB search
MATFTDLGLSESIIRSIINMGFEETTPIQEQTIPIAMEGRDLIGQAQTGTGKTAAYGIPL
IERIVGQSEHIQGIVLAPTRELAVQVAEELNKIGQYKRIHALPIYGGQGIEWQIRALKKR
PHIIVATPGRLMDHMRRKTIRLNDIKILVLDEADEMLNMGFLDDIETILKEVPEERQTLL
FSATMPRQIQNIAHRFMQEPQLISIKATGVTVSDIEQHYVEVTERLKFDVLSRILDIQSP
ELSIVFARTKKRVDELAEALSKRGYSAEGIHGDLTQNKRDSVLRQFKDGTIEVLVATDVA
ARGLDISGVTHVFNFDIPQDPESYVHRVGRTGRAGKSGLAITLVTPREIGMLRLIESVIK
RRIVRKPIPTIVEAVQGQQRLTMNEVLRVIAEEDIEKYKALAEELLAENDSVTLLSAALK
IITKEPEHVEVQLTEAAPVRRRGMGGRSMGGGRGMANRPQGNYHREGYSPKPDTWSRRKA
NDYRGASSGFQRGRDNKRNG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttggcgacatttacagacttaggtttaagtgagtccataattcgatcgattattaacatg
gggtttgaagagacaacacctattcaagagcagacgattcccattgctatggaagggcgg
gatctgataggacaggctcaaaccggaacaggaaaaactgcggcttacggaattcctctg
atcgaaagaatcgtaggacaatctgagcatattcaaggtattgttctagctccaaccagg
gaattggcagttcaagtagctgaggaattgaacaagattggtcaatataaacggatacat
gccttacccatttacggaggccaaggcattgaatggcaaatcagggctcttaagaaaaga
ccccatatcattgtggcaactccggggcgtctcatggaccatatgagaaggaaaaccatt
cgcctgaatgacattaaaattcttgttctggatgaggcagatgagatgttaaatatgggc
ttcttggatgatattgaaaccattcttaaagaagttcctgaggaaagacaaacattgctg
ttctcagctactatgccaagacagattcaaaacatcgctcatcgttttatgcaagaaccc
cagttaatcagcattaaagccacgggggttaccgtttcagatattgagcagcattatgta
gaagttacagaacgcttaaagtttgatgtcctgtcaagaattttagacatacaatccccg
gaactgtctatagtttttgcaagaactaaaaagcgtgtggacgagctcgctgaggcttta
agcaagagaggttattcggctgaaggaattcatggtgacttgactcaaaataagagggac
agtgttttaaggcagtttaaagatggtactatcgaagttctggttgctacggatgtggcg
gcaagaggcttggatatcagtggcgtaacccatgtctttaattttgatataccccaagac
ccggaaagctatgtgcatcgtgtcggtcgaacaggacgagccggcaaatccggtctggcg
attaccttagtcacaccacgggaaattggcatgcttcgtttaattgaatcagtgattaag
cgacgaatcgttcgtaaacctattccgacgatcgtagaagcagtacaaggccagcagcgt
ttgaccatgaatgaggttctgagggttatagccgaagaagacattgaaaaatataaggca
ttagcggaagagcttctcgccgaaaatgattcagtgacacttttatcagcagccttgaaa
atcatcacgaaagaacctgaacatgtagaagtacaattgactgaagccgcacctgtgcgc
agaagaggcatgggaggaagaagtatgggaggcggcagaggtatggccaatagacctcag
ggcaactaccaccgggaaggctacagccctaaaccggatacatggtctcggaggaaagcc
aacgattaccgcggcgcttcttccggttttcaaagaggaagagataacaagcgaaacggt
taa
DBGET
integrated database retrieval system
