Dipodomys ordii (Ord's kangaroo rat): 105980189
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Entry
105980189 CDS
T07834
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105980189 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105980189 (Fip1l1)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105980189 (Fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
105980189
NCBI-ProteinID:
XP_012864376
Ensembl:
ENSDORG00000005629
UniProt:
A0A1S3EJ40
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDEATENGVPK
PKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGTTGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGRTGNSEKETALPSTKA
EFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYGRAESPDLRRLPGAID
VIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFL
PPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIERTKVTRCIVSSNILKKS
KLKILIAFPHLTGSAPSWPSLVDTTKQWDYYARREKDRDRERDRDRERDRDRDRERERTR
ERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKS
SRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctgtatggcgatgaaaatgaagttgaaaggccagaagaagaaaat
gccagtgctaatcctccatctggaattgaagatgaagccactgaaaatggagtaccaaaa
ccgaaagtgaccgagactgaagatgatagtgatagtgacagtgatgatgatgaagatgat
gttcatgtcactatcggagatattaaaacaggagcaccacagtatgggagttatggtaca
gcacctgtaaatcttaacattaagacggggggaagagtttatgggactacaggaacaaaa
gtaaaaggggtagatcttgatgcacctggcagtattaatggagttccactcttggaggtc
gatttggattcttttgaagataagccatggcgtaaacctggtgctgatctttctgattat
tttaattatgggtttaatgaagatacttggaaagcttactgtgaaaaacaaaaaaggata
cgaatggggcttgaagttataccagttacttctactacaaataaaattacggccgaagac
tgtactatggaagttacaccaggtgcagagatccaagatggcagattcaatctttttaag
gtacagcaggggagaacaggaaattcagagaaagaaacagcacttccatctacaaaagct
gagtttacttctcctccatctttgtttaaaactggacttccacctagcagaaacagcacc
tcttctcagtctcagacaagtactgcttcgagaaaagccaattcaagtgttgggaagtgg
caggatcgttatggaagggccgaatctcctgatctaaggagattacctggagcaattgat
gtaattggtcagactataactattagtcgagtagaaggaaggagacgtgcaaatgaaaac
agcaatatacaggtcctttctgaaagatctgctactgaagtagacaacaattttagcaaa
ccacctccatttttccctccaggagctcctcctacccatcttcctccgcccccctttctt
ccacctcctccaactgtcagcactgctccacctctgatcccaccaccaggtattccaata
actgtaccacctccaggttttcctcctccaccaggcgctccaccaccatctcttatacca
acaatagaaagaactaaggtgaccagatgtattgtcagcagtaatattttgaagaaatct
aagcttaaaatactcattgcctttccccatcttactggttctgctccttcatggcctagt
cttgtggacaccaccaagcagtgggactattatgcaagaagagagaaagaccgcgataga
gaaagagacagagacagagaacgagatcgtgatcgggacagagaacgagaacggaccaga
gaaagagagagagaacgtgatcacagtcccacaccaagtgtctttaacagtgatgaggaa
cgatacagatacagggaatatgcagaaagaggctatgagcgtcacagagcaagtcgagag
aaagaagaacggcatagagaaagacgacaccgagagaaggaagaaacaagacacaagtca
tcccgcagtaatagcagacgtcgccatgaaagtgaagaaggagacagtcacaggagacac
aagcacaaaaaatcaaaaagaagcaaagaaggaaaagaagctggcagtgaacctgctcct
gaacaagagagcaccgaagctgcacctgcagaatag
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