Dipodomys ordii (Ord's kangaroo rat): 105980199
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Entry
105980199 CDS
T07834
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03020
RNA polymerase
dord03420
Nucleotide excision repair
dord05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105980199 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
105980199 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
105980199 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105980199 (Polr2b)
03400 DNA repair and recombination proteins [BR:
dord03400
]
105980199 (Polr2b)
Enzymes [BR:
dord01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105980199 (Polr2b)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105980199 (Polr2b)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105980199 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
DUF5817
Motif
Other DBs
NCBI-GeneID:
105980199
NCBI-ProteinID:
XP_012864385
Ensembl:
ENSDORG00000010077
UniProt:
A0A1S3EKB6
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MYDADEGRCPLRDTRVLTHLSGEAEGSGVGGGSAARLPSPQPRDPRPSRARASSYFDEKG
LVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTH
WERDGAPSPMMPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRS
TYCLLNGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYT
GECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGF
VSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKY
AKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGP
LLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKK
AHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGH
AVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHK
DPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKR
HIDQLKEREYNNSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEY
LRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQE
EVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRR
YTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCG
IQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAV
NVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGP
IQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMA
IANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgagggtaggtgtcccctgcgagacacccgtgtgctgacccacctc
agcggggaagccgaggggtccggggtgggtggagggtctgcggcccgcctccccagcccg
cagccgcgggacccccgcccgagccgggcccgagccagttcctattttgatgaaaaaggc
ttggtgagacaacagctggattcttttgatgagtttattcagatgtcagttcaaagaatt
gtggaagatgctccacccattgacctgcaagctgaagctcagcatgctagtggagaggtt
gaagaaccgccaagatacctgctaaagtttgaacaaatttatctctccaagcctacacat
tgggagagagatggtgccccttcaccaatgatgcccaatgaagccagattaagaaatctc
acgtattctgctccactttatgttgacataacaaaaacagtcattaaagaaggtgaagaa
caacttcagactcagcatcagaaaacttttataggaaagattccaattatgttgcgttca
acttactgcctcttgaatggcttaacagatcgtgatctttgtgaattaaatgaatgtcct
ttggatcctggtggctatttcatcattaatgggtcagaaaaggttctaattgctcaagag
aaaatggcaacaaacacagtctacgtgtttgccaaaaaagactctaaatatgcctacaca
ggagagtgtagatcatgtctggagaattcttcccgacctaccagtactatatgggttagc
atgctggcaagaggaggacagggtgcaaaaaagagtgctattggtcagcgcattgtggca
actctaccatatatcaagcaagaggttcccatcatcattgtgttcagagctctaggtttt
gtgtctgaccgagatatcttagaacatattatttatgattttgaagacccagagatgatg
gaaatggttaaaccttctcttgatgaagccttcgtcattcaagaacagaatgttgcatta
aatttcattggttcaagaggagcaaagcctggtgttactaaagagaaaagaattaaatat
gcaaaggaagtcttacaaaaggaaatgcttcctcatgttggtgtcagcgatttttgtgag
actaaaaaagcctatttcttggggtatatggttcataggttacttctagcagctttgggt
agaagagaactagatgaccgagatcactatgggaacaaaagattggatcttgctgggccc
ttacttgcattcttatttagaggcatgtttaagaatttgctaaaagaagtacggatctat
gcacagaaatttattgatcgaggaaaggactttaacttggaattggcaattaaaacaaga
attatatcggatgggctcaaatactctttagctactggaaactggggtgaccaaaagaaa
gctcatcaagccagagctggagtatctcaggttttaaaccgcctgactttcgcttctact
ctttctcacctgcgtcgattaaattctcctattggtagagatggcaagctagcaaagcca
agacaattgcataacaccctgtggggaatggtgtgtcctgctgagaccccagagggccat
gctgtaggacttgtgaagaatttagccctgatggcttatatttctgttggatctcaacca
tctccaattctggagtttttagaagaatggagcatggaaaatttagaagagatttctcct
gcagctattgctgatgccactaagatttttgttaatggatgctgggtgggaatacataaa
gatcctgagcaacttatgaacacactaagaaaattgcgacgtcagatggacatcattgtg
tctgaggtgtctatgatcagagatattcgtgagagagaaattcgtatctatacagatgca
ggccgtatttgtagaccgcttctgattgtggaaaaacagaagctacttttgaagaaaaga
cacattgaccagttgaaagagagagaatataacaactccccaagaaacacataccagtct
gctatgggtaagcaggccatgggagtttatataaccaacttccatgttcgtatggataca
ctggcccatgttctctactatcctcaaaagccacttgtgaccacccggtctatggaatac
ctacgatttagagaattgccagcaggaatcaactcaattgtggccattgcatcatacact
ggatataatcaagaagactctgttatcatgaatcgctcagccgtagaccgaggctttttc
aggtctgttttctaccgctcatataaagaacaagagtctaaaaaaggatttgatcaagaa
gaagtttttgagaagcctacgcgtgaaacatgccaaggtatgaggcatgccatttatgac
aagctggatgatgatgggctgatcgctccaggggtccgtgtatcaggagatgatgttatc
atcggcaaaacagtcaccttgcctgaaaatgaagatgagctggagagcaccaacaggcgc
tataccaagagagactgtagcactttccttcgaaccagtgagacaggcattgtggaccag
gtgatggtaactctgaaccaagaaggatacaagttttgcaaaataagggtgcgctctgtt
agaatcccacagattggagacaaatttgctagtcgtcacggccagaagggtacttgtggt
attcaatatagacaagaggacatgcctttcacctgtgaaggtatcactcctgacatcatc
ataaatccccatgccatcccctctcgaatgactattggtcacttgattgaatgtcttcaa
ggaaaggtatcagctaacaagggtgaaattggtgatgccactccatttaatgatgctgtt
aatgtccagaagatttctaatctcctgtcggattatggctaccatctcagaggaaatgag
gtcctctacaatgggttcactggtcgaaaaatcacctcacaaatttttattggcccaact
tactaccagcgcttgaagcatatggtggatgacaaaattcattctcgtgctaggggacct
attcagatcctgaatagacagcctatggaaggtagatctcgtgatggtggcttgcgcttt
ggagaaatggaacgtgactgtcagattgcccatggagcagcccaatttttaagagaaaga
ttgtttgaggcttccgatccctatcaggttcatgtgtgtaacctttgtggaattatggca
attgctaacaccaggacacatacgtatgaatgcaggggttgccgaaataaaacccagatt
tctttggtgcgaatgccttacgcgtgcaaactgttgtttcaggaacttatgtctatgagt
attgcacctcgaatgatgagtgtttaa
DBGET
integrated database retrieval system
