Dipodomys ordii (Ord's kangaroo rat): 105980270
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Entry
105980270 CDS
T07834
Symbol
Dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105980270 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105980270 (Dhx15)
03009 Ribosome biogenesis [BR:
dord03009
]
105980270 (Dhx15)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105980270 (Dhx15)
Spliceosome [BR:
dord03041
]
Complex A
U2 snRNP components
U2 related factors
105980270 (Dhx15)
Complex B
105980270 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105980270 (Dhx15)
Ribosome biogenesis [BR:
dord03009
]
Eukaryotic type
90S particles
Helicases
105980270 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
105980270
NCBI-ProteinID:
XP_012864460
Ensembl:
ENSDORG00000013848
UniProt:
A0A1S3EKJ2
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSAHSAHSTHSTHSAHSAHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccggttggatctcggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagatcgagatcgtgaccgggaccgtgaagatcgttccaaagatcga
gatcgagaacgtgatagaggagatagagaacgagagagggagaaagaaaaggagaaggag
ttgcgagcttcaactaatgctatgcttatcagtgctggattgccacctttaaaagcatct
cattcagctcattcagcccactcagctcattcaacacattctacacattctgctcactca
gctcacactggacatgcaggacacacatcactgccacagtgcattaatccattcaccaac
ttaccccatacccctcgatactatgatattctaaagaaacgtcttcaactccctgtatgg
gaatacaaggataggtttacagatattcttgttagacatcagtcgtttgtactggttggt
gagactgggtctggtaaaacaacacagattcctcaatggtgtgtggaatacatgcgatca
ttaccaggacccaagagaggagttgcctgtacccaacccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtaatgctgggccaggaagttggttactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatggaatg
ctacttcgtgaagccatgaatgatcccctcctggagcgctatggtgtaataattcttgat
gaagctcatgaaagaacacttgctacagatattctgatgggtgtcctaaaggaggttgta
agacagagatcagacttaaaggttatagttatgagtgctactctagatgcaggaaaattc
cagatttacttcgacaactgtcctcttttaactattcctggacgtacacatcctgttgag
atcttttatactccagaacctgaaagagattatcttgaggcagcaattcgaacagtgatc
cagatacatatgtgtgaagaagaagaaggagatctcctcctttttttaactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggccctgaagtt
ggtgacattaaaatcattccactgtactctacgcttccaccccagcagcagcaacgcatt
tttgagcctccgcctccaaaaaaacagaatggagcaattggaagaaaggtagttgtgtca
accaacattgcagagacatctttgacaatagatggtgtggtgtttgtgattgatcctgga
tttgccaaacaaaaggtatacaatcctcgaatcagggttgagtctctgctggtgacagct
attagtaaagcttcggctcaacaaagggctggtcgagctggacgtaccagacctggaaag
tgcttcagactgtacacagaaaaagcttataaaacagaaatgcaggataacacctatcct
gagattctgcgttctaatttaggatctgttgtgttacaattgaagaaacttggtattgat
gatttggtgcattttgattttatggatccaccagctcctgaaactctgatgagagcccta
gaacttttgaattatctggccgctctaaatgatgatggagatctgactgaattgggatcc
atgatggcagagtttcctctcgatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccacgcttttaaacaaaatcatgaatcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtctgcagacaatgta
cgccagcagctatcgcgaattatggacagatttaacttgcctcgtcgaagtactgacttc
acaagcagggactattatattaatataagaaaagctttggttactggctattttatgcag
gtggcacatttagaacgaacaggacattacttaactgtgaaggataaccaggtggttcag
ttgcatccctctactgttcttgaccacaaacctgaatgggtgctttataatgagtttgtt
ctaacaacaaaaaattacatccggacatgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcattattgccaaacttcaatccaaggaatattcacagtactga
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integrated database retrieval system
