Dipodomys ordii (Ord's kangaroo rat): 105980279
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Entry
105980279 CDS
T07834
Symbol
Tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04152
AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
105980279 (Tbc1d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105980279 (Tbc1d1)
Membrane trafficking [BR:
dord04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105980279 (Tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105980279 (Tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
105980279 (Tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
ER
Motif
Other DBs
NCBI-GeneID:
105980279
NCBI-ProteinID:
XP_012864477
Ensembl:
ENSDORG00000010269
UniProt:
A0A1S3EJB7
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEPITFTARKHTFPNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQASKKEPV
TKQVRLWVSPSGLKCEPDPGRSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKE
DAAHRQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGR
VTVAHKKAPPALIDECIEKFNHVSCSRRADWDAAAPSGEPGPGEPRRPMRKSFSQPGLRS
LAFRKEFQDASRRSSSFFSSFEECDIENHLISGHNIVQPTDIEENRTMLFTIGQSEVYLI
SPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGGGGFHFVCYVFQCANEALVDEI
MMTLKQAFTVAAVQQTAKAPAQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLTN
QEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKEHIHIGEMKQIAAENIGSELPP
SATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSSSVDLDSSMSSTLSNTSKEPS
MGDRDAMPNSESSFKLLSSSDDLSSDSESHLPEEPALLSPQQAFRRRANTLSHFPVEGPE
SSEPVQRSPGVAQRKLLRYHSVSTETPHERNISYRNALRKKLHSSSSVPNFLKFLAPVDE
NNTSDFMNTKRDYESKANHFGDSDTTPVKTRRHSWRQQIFLRVATPQKACDSPSRYDDYS
ELGELPPRSPLEPVCEDGPFGPVPEGKKRTSRELRELWKKAILQQILLLRMEKENQKLQA
SENDLQNKRLKLDYEEITPCLKEVTTIWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHR
GEIWKFLAEQFHLKHPFPSKQQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQL
GAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQY
RPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARV
FDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKNTLPNLGLVQMEKTINQVF
EMDIAKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANS
RIQSLEATIEKLLSNESKLKQATLALELERSALLQMVEELRRPPAQASEGPGA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggagcccataacattcacagcaaggaagcacacatttcctaatgaggtctcggtggac
ttcggccttcagctggtaggctctttgcctgtgcattctctcaccaccatgcccatgctg
ccatgggtggtggctgaggtgcgaagacttagtggacaggcctccaaaaaagagcctgtc
actaagcaagtgcgactttgggtttcaccctctggactgaaatgtgaacctgacccaggg
agaagtcaacaatgggacccactgatctgctccagcatctttgagtgcaagccccagcgt
gtgcacaaactgattcataatagtcatgaccccagttattttgcttgtctcattaaggaa
gatgctgcgcaccggcagagtatctgctatgtcttcaaagccgacgatcagactaaagtg
cctgagatcatcagctccatccgacaggccggcaagatcgcccgccaggaggagctgcgc
tgcccctcggagttcgacgacaccttcgccaagaagttcgaggtgctcttctgcggccgt
gtgaccgtggcccacaagaaggccccgccagccctgatcgacgagtgcatcgagaagttc
aaccacgtgagctgcagccggagggcagactgggatgcggccgccccttctggggagccg
gggcccggggagccccgcaggcccatgcgcaagtccttctcgcagcccggcctgcgctcc
ctggccttccggaaggagttccaggacgccagccggcggagcagcagcttcttcagctcc
ttcgaggaatgcgacatcgagaaccacctcattagtggacacaatattgtgcagccaaca
gatattgaggaaaatcgaactatgctcttcacgattggccagtctgaagtttacctcatc
agtcctgacaccaaaaaaatagcattggagaaaaattttaaggagatatccttttgctct
cagggtatcagacatgtggaccattttgggtttatctgccgggagtcttctggtggcggt
ggctttcatttcgtctgttacgtgttccagtgtgcaaatgaagcgctggttgacgaaatc
atgatgactctgaagcaggctttcacagtggctgcggtgcagcagacggcaaaggcacca
gcccagctgtgtgagggctgccctctgcaaggcctgcacaagctctgtgagcggattgag
ggaatgaattcctctaaaaccaaattagaacttcagaagcacctgacaacactgacaaat
caggaacaggccactattttcgaggaggttcagaaattgagaccaagaaatgagcagcga
gagaatgaattaattatttcttttctgagatgtttatatgaagagaaacaaaaagagcac
atccacattggagagatgaaacagattgcagcagagaatattggaagtgaattaccacct
agtgctactcgttttaggctagatatgctgaaaaacaaagcaaagcgatctttaacagaa
tctttagaaagtattttatcccggggcaataaggccagaggcctgcaggaacattcctcc
agtgtggatctggacagctccatgtctagcacattaagtaacactagcaaggagccatcc
atgggtgacagggatgccatgcctaattctgagagctccttcaagcttctcagctcctcg
gatgacctgtccagtgactcggagagccacctcccagaagagcctgccctgctgtcaccc
cagcaggccttccgaagacgagcgaacaccctgagccatttcccagtggagggcccggag
tcttcggagcctgtgcagagatctccaggagtcgctcaaagaaaacttttgaggtatcac
tccgtgagcacagagacacctcatgaacgaaacatctcctaccgtaatgccctgcggaaa
aaacttcattcttcttcctctgtgccaaattttctaaaatttctggctcctgtagatgaa
aataacacctctgactttatgaacacaaaaagggactatgaatccaaagcgaatcacttt
ggtgactcggacacgacccctgtgaagacccggcggcattcatggcgccagcagatcttc
ctccgcgtggccacaccacagaaggcctgtgattcccccagcagatatgatgattattcg
gagctgggagaacttcccccacggtctcctttagaaccagtatgtgaagatggaccattt
ggccctgtaccagagggaaaaaaaaggacgtcacgtgaactgcgagagctctggaaaaag
gctattctgcaacagatactcctcctaaggatggagaaagaaaatcagaagctacaagcc
tccgagaatgatttgcaaaataagcgcctaaagcttgattatgaagaaatcactccttgc
ctaaaagaagtaactaccatatgggaaaagatgcttagcactccaggaagatcaaaaatt
aagtttgacatggaaaaaatgcactcagctgttgggcaaggtgtgccacgtcatcaccgt
ggtgaaatctggaaatttctagctgagcagttccaccttaaacacccatttcccagtaaa
cagcagccaaaggatgtgccctacaaagaactcttaaaacagctcacctcccagcagcat
gcgattctcatcgacctggggcgaacctttccaacacatccatacttctctgcccagctt
ggagcagggcagctgtcgctttacaacattctgaaggcctactcacttctggaccaggaa
gtaggatactgccaaggtctcagctttgtggctggcattttgcttcttcatatgagtgag
gaagaggcatttaaaatgctcaagtttctgatgtttgacatgggactacgaaaacagtat
cggccagacatgataattttacagatccagatgtaccagctctcaaggcttcttcatgat
taccacagagacctctacaatcacctggaggagcacgagatcggccccagcctctatgct
gcaccctggtttctcactgtatttgcctcgcagttcccattgggatttgtagccagagtc
tttgatatgatcttccttcagggatcagaagtcatatttaaagtggctttaagtcttctg
ggtagccataagcccttgattctacagcatgaaaacctagagaccatagtggactttata
aaaaacacactacccaacctgggcttggtacaaatggagaagaccatcaaccaggtgttt
gagatggatattgctaaacagttacaagcttatgaggttgagtaccatgtgcttcaagaa
gaacttattgattcctctcctctcagtgacaaccaaagaatggataaattagagaaaacc
aacagcagcttacgcaaacagaaccttgacctcctagaacaattgcaggtggcaaatagc
agaatccaaagccttgaggccacaatagagaagctgctgagcaatgaaagcaagctgaag
caggccacgctggctttggagctggagcggtctgcgctgctgcagatggtagaggagctg
cggaggccacctgcccaggccagcgagggccctggagcctga
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integrated database retrieval system
