Dipodomys ordii (Ord's kangaroo rat): 105980490
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Entry
105980490 CDS
T07834
Symbol
Fbxo18
Name
(RefSeq) F-box only protein 18 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dord04121
]
105980490 (Fbxo18)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105980490 (Fbxo18)
Ubiquitin system [BR:
dord04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105980490 (Fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
F-box
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
zf_Tbcl_Rhp7
F-box_4
ResIII
AAA_12
Motif
Other DBs
NCBI-GeneID:
105980490
NCBI-ProteinID:
XP_012864779
UniProt:
A0A1S3ELF0
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MQRFKRKHLTAIDCQHLAQSHLAGTQPFGQRWTNRDPNHGLYPRPRTQRGSRGQGCRRHS
PEFFLAGQQQCTNDMAKSSSVGQDSCQDSEGHMIFPAEGSYALPQEGDGEVRVGSSRSAL
PPRKRSRSFEEDSNKVTGTKQWDGVAKKTARLQLSPPCTRPREAMQEAEDCLSQHSADSG
ETVQDIEDIGPDPIPDSYYGLLGTLPCQEPPSHICSLPNEVLRHIFAFLPVEDLYWNLSL
VCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKVDGILLNCGIEKESDLCVLNLIRYTA
TTKCSPSVDPERVLWSLRDHPLLPEAEACVRQYLPDLYMAAGGINVWALVAAMVLLSSGV
HDIQQLLFCLRRPGSTVTMPDVTETLYCIAVLLYAMREKGINISNRIHYNIFYCLYLQEN
SNTQATKVKEEPSVWPGKKASIQLTHEQQLILNHKMEPLQVVKIMAFAGTGKTSTLVKYA
EKWSQSRFLYVTFNKSIAKQAELVFPSNVICKTFHSMAYGHVGRKYQLKKKLNLFKLTPF
MVNSVLAEGKGGFIRAKLVCKTLENFFASADEELTIDHVPIWCKNSQGQRVMVEQSEKLN
GVLEASRLWDNMRKLGECKEEAYQMTHDGYLKLWQLSKPLLASFDAIFVDEAQDCTPAIM
NIVLSQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYLTQSFRFGVEIAYVGATILD
VCKRVRKKTLVGGNHQSGIRGDVKGQVALLSRTNANVFDEAVRVTEGEVPSKIHLIGGIK
SFGLDRIIDIWTLLQPEEERKKRNLVIRDRFIRRWVHKEGFSGFKRYVTAAEDKELEAKI
AVVEKYNIRIPELVERIERCHIEDLDFAEYILGTVHKAKGLEFDTVHVLDDFVKVPCARH
NLAQLPHFRVESFSEDEWNLLYVAVTRAKKRLIMTKSLENILTLAGEYFLQAELTSNVLK
TGVVRCCVGQCNNAIPVDTVLTMKKLPITYSNRKENQGGYLCHSCAEQRIGPLAFLTASP
EQVRAMERTVENIVLPRHEALLFLVF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgatttaagcggaagcatcttacagctatcgactgccagcatttggctcagagt
cacttggctggaacccagcccttcggccaaagatggacaaacagagatcccaaccatggt
ctctatcctagacccagaacacaaagagggagtaggggtcaaggatgtcgaagacacagt
cctgagttcttcctagctggccagcagcagtgcaccaatgacatggccaagagcagttca
gttggccaggacagctgtcaggactctgagggtcacatgatctttcctgctgagggcagt
tacgccctgccccaggaaggcgatggagaagtgagagtaggctcatcaaggtcagctcta
cctcccaggaagaggtcccggtcctttgaggaagacagcaataaggttacagggaccaag
cagtgggatggagtggctaagaagactgcacggcttcagttgtccccaccgtgcacaagg
cctagggaggccatgcaagaagcagaggactgtttgtcacagcactctgcagattctgga
gaaactgtccaagacattgaggacattggtcctgaccccattcctgactcatactatggc
cttcttgggaccttgccctgccaagaaccaccaagccacatttgtagcttgcctaatgaa
gtcctgaggcatatctttgccttcctgcctgtggaagacctctactggaatctgagcctg
gtgtgccacctgtggagggaaataatcagtgacccactgttcattccttggaaaaagctg
tatcatcgatacctgatgaatgaagagcaagctgtgagcaaagtggacggcatcctcttg
aactgtggcatagaaaaggagtcagacttgtgtgtgctgaacctcatacgatacacagcc
accactaagtgctccccaagtgtggatcctgagagggtgctgtggagtctgagggatcat
cctctccttcctgaggcagaggcatgtgtgcgtcagtacctgcccgacctctacatggct
gctgggggcattaatgtctgggccttggtggcagccatggtgcttctctccagcggcgtc
cacgacatccagcagctgctgttctgcctcaggagacccggctccacagtgaccatgcca
gatgtcaccgaaaccttatactgtatagctgtgctgctctacgccatgagggagaaggga
atcaacatcagcaataggattcactacaacattttctactgcctatatcttcaggagaat
tctaatactcaggccactaaagttaaggaggagccatctgtctggccaggcaagaaagca
tctattcaacttacacatgagcaacagctgattctgaaccataaaatggagcctctccag
gtggtaaaaattatggcctttgcaggcaccgggaagacctctaccctagtcaagtacgcc
gagaagtggtctcagagcagatttctgtatgtcacattcaacaagagcatcgcaaagcag
gctgagctcgtcttccccagtaatgtcatctgcaaaacctttcattccatggcctacggg
cacgtcgggcggaagtaccagctgaagaagaagttgaatctcttcaagttgacgcctttc
atggtcaattcggttcttgctgaagggaaaggtggattcatcagggccaagcttgtatgt
aagactttggaaaatttctttgcctccgctgatgaagagctgactattgatcatgtacct
atttggtgtaagaacagccaaggacagagagtcatggttgaacagagtgagaagttgaat
ggtgtccttgaagcaagccgactctgggacaacatgcggaagctgggagaatgcaaagaa
gaggcttaccaaatgactcatgatggctatttgaaactctggcagctgagcaagcctttg
cttgcctcttttgacgccatctttgtggatgaggcccaggactgtaccccagctataatg
aatatagttctgtctcagccatgtgggaagatctttgtaggggacccacaccaacagatc
tataccttccggggtgcagtcaatgctctgttcacagttccccacactcacgtcttctat
ctcacacagagttttagatttggtgtggaaatagcttatgtgggagctactatcttggat
gtctgcaagagagtaaggaagaagacgttggttggaggaaaccatcaaagtggcattcga
ggtgatgtaaagggacaagtggctcttttgtcacggaccaatgccaacgtgtttgatgag
gctgtcagggtgacagaaggagaagtaccttccaagatacatttgattggggggattaaa
tcatttggactggacagaatcattgatatttggactcttcttcagccagaggaagaacgg
aagaaacgaaacctcgtcatcagggacagattcatcagaagatgggtgcataaagaaggc
ttcagtggctttaagagatatgtgactgctgctgaggacaaggagcttgaagcaaagatc
gctgtggttgaaaagtacaatatcaggattccagaactggtggaaaggatagaaagatgc
cacatagaagacttggactttgcagagtacatcttgggtactgtacacaaagccaaaggc
ctggagtttgacactgtgcacgttctggatgatttcgtgaaagtgccttgtgccaggcat
aatcttgcccagcttcctcactttagagttgagtcattttctgaggatgagtggaattta
ctgtatgttgcagtaacgcgtgccaagaagcgtctcataatgaccaaatcactggaaaac
attttgactcttgctggggagtacttcctgcaagcagagctgacaagtaatgtcttaaaa
acaggagtggttcgctgctgtgtgggccagtgcaataacgccatccccgtggacacggtc
ctcaccatgaagaaactgcccatcacttacagcaacaggaaggaaaaccagggtgggtac
ctgtgtcactcatgtgcagagcagcggattgggcctttggcgttcttaactgcctctccg
gagcaggtacgggccatggagcgcactgtggagaacatagttctgcccaggcacgaagcc
ctgctcttccttgtcttctga
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