Dipodomys ordii (Ord's kangaroo rat): 105980612
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Entry
105980612 CDS
T07834
Symbol
Dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dord04515
]
105980612 (Dscaml1)
Cell adhesion molecules [BR:
dord04515
]
Immunoglobulin superfamily
DSCAM family
105980612 (Dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
C1-set
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
105980612
NCBI-ProteinID:
XP_012864947
Ensembl:
ENSDORG00000010623
UniProt:
A0A1S3EN87
LinkDB
All DBs
Position
Unknown
AA seq
1994 aa
AA seq
DB search
MARPEDVGTSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWYLATGDDIYDVPHIR
HVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRVKAVFREPYTVRVEDQ
RSMRGNVAVFKCLIPSTVQEYVSVVSWEKDTVSISPGNRFFITSHGGLYIADVQKEDALS
TYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTGRTVELPCTASGYPI
PAVRWLKDGRPLPADSRWTKRITGLSISDLRTEDSGSYICEVTNTFGSAEATGTLTVIDP
LHVSLTPKKLKTGIGSTVILSCALTGSPEFSIRWYRNTELVLPDEAISIRGLSNETLLIT
SAQKSHSGAYQCFATRKSQTAQDFAIIVLEDGTPRIISSFSEKVVNPGEQFSLMCAAKGA
PPPTLTWALDDESVVRDGGHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSA
EYQARINVRGPPSIRAMKNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVF
ENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQTVHVAVKVPPLIQPFEFPPASIGQLLY
IPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNA
AATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQ
YHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAMITSH
PNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATKDNGDEVVSTLKL
KPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGN
SIITGFDIEYKNKSDTWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPS
KELTISTEEAAPDGPPMGVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSN
GQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPP
ENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVEL
RGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPP
TKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRG
NSSEKVTIEPAGKAPAKIISFGGTVTTPWMRDVRLPCNSVGDPAPAVKWTKDSEDSAIPM
ALDGHRLIHSNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKT
SASSITLTWIPGDNGGSSIRGFVLQYSEDNSEEWKDVLISSGERSFKLDSLKCGTWYKVK
LAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNHGGCPITAIL
LEYRPKGGWAWQSLRANSSAEVFLTELREATWYELRMRACNSAGCSNETAQFATLDYDGS
TIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRLKRLRDAKSLAEML
ISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDAEFSQAVN
PQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRNRYSSQWTLTKCQ
ASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARA
YEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPP
KPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPCPVVPPREASIRNLA
RTYHPQARHLTLDPASKPLGLPHPGAPAAATTATLPQRTLAMPAPPAGTVLRSQKPLGKN
MSSMLTRELIPVHS
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccctgaggatgtcggcaccagcctctactttgtaaatgactccctgcagcag
gtgactttctccagctccgtgggggtggtggtgccctgcccggccgcgggctcccccagc
gcggcccttcgatggtacctggccacgggggacgacatctacgacgtgccccacattcgg
cacgtgcacgccaacgggacgctgcagctctaccccttctccccctccgccttcaatagc
ttcatccacgacaatgactacttctgcaccgcggagaatgctgcgggcaagatccggagc
cccaacatccgcgtcaaagcagttttcagggaaccctacaccgtccgggtggaggatcaa
aggtcaatgcgtggaaacgtggcggtcttcaagtgcctcattccttctacagtgcaggag
tacgttagcgttgtatcctgggagaaagacacggtctccatcagcccaggaaatagattt
tttatcacttcccacggagggctgtacatcgctgacgtgcaaaaggaggacgccctctcc
acctaccgctgcatcaccaagcacaagtacagcggagagaccaggcagagcaacggggcc
cgcctctccgtgaccgaccctgccgagtccatccccaccatcctggacggcttccactcc
caggaagtgtggactggccgcacggtggagcttccctgcacggcctcaggctaccccatc
cctgccgtccgatggctcaaggatggacggcccctccccgccgacagccgctggaccaag
cgcatcacagggctgagcatcagcgacctgcgcaccgaggacagcggcagctacatctgt
gaagtcaccaacaccttcggctcggcagaggccacgggcaccctcacggtcatcgacccc
cttcacgtgagcctgacaccaaaaaagctgaagacgggcatcggcagcacagtcatcctg
tcctgtgccctcacgggctccccggagttcagcatccgctggtaccggaacacggagctg
gtgctgcccgacgaggccatctccatccgagggctcagcaacgagaccctgctcatcacc
tcggcccagaagagccactcgggggcctaccagtgctttgccacccgcaagagccagacg
gcccaggacttcgccatcattgtgctggaggacggcacgcctcgcatcatctcctccttc
agcgagaaggtggtgaaccctggggaacaattctccctgatgtgcgcggccaagggcgcc
ccgccccccacgctcacctgggccctggatgacgagtccgtcgtgcgggacggaggccac
cgcaccaaccagtacaccatgtccgacggtaccaccatcagccacatgaacgttacgggc
ccccagatccgagacgggggtgtttaccggtgcaccgcgcggaactcggtgggcagtgct
gaatatcaggcacgaataaacgtaagaggaccccccagcatccgggcaatgaagaacatc
acagctgtggccggaagagacaccctcatcaactgcagggtcatcggctacccctactac
tccatcaagtggtacaaggacgccctgctgctgccggacaaccaccggcaggtggtgttc
gagaacgggaccctgaagctgacggacgtgcagaagggcatggacgagggggagtacctg
tgcagcgtcctcatccagccccagctctccatcagccagaccgtgcatgtggctgtcaaa
gtgccccctctgatccagcccttcgagttcccacccgcctccatcggccagctgctctac
atcccctgtgtggtgtcctcgggggacatgcccatccgcatcacgtggaggaaggatgga
caggtgatcatctccggctcgggtgtgaccatcgagagcaaagagttcatgagctccctg
cagatctccagcgtctccctcaagcacaacggcaactacacttgcatcgccagcaacgcg
gcggccaccgtgagccgggagcgccagctcattgtgcgtgtgcctcctcgattcgtggtg
cagcccaacaaccaggacggcatctacggcaaagccggggtgctcaactgctcggtggat
ggctacccgccccccaaggtcatgtggaagcacgccaaagggagcgggaacccccagcag
taccaccccgtgcccctcaccggccgcatccagatcctgcccaacagctccctgctgatc
cgccacgtcctagaagaggacatcggctactacctctgccaggccagcaacggtgtgggc
accgacatcagcaaggccatgttcctcaccgtcaaaatcccagccatgatcacctcccac
cccaacaccaccatcgccatcaagggccacgcgaaggagctgaactgcacagcgcgtggg
gagaggcccatcatcatccgctgggagaagggggacaccgtcatcgaccccgacagggtc
atgcggtacgccatcgccaccaaggacaatggggacgaggtggtctccacgctgaagctc
aagccagctgaccgtggggactctgtgttcttcagctgccacgccatcaactcgtacggg
gaggaccggggcttgatccagctcactgtgcaagagcctcctgaccctccagagctggag
atccgggaggtgaaggcccggagcatgaacctgcgctggacccagcgattcgatggcaac
agtatcatcacaggtttcgacatcgaatacaagaacaaatcagatacctgggacttcaag
cagtccacacgcaacatctcccccaccatcaaccaggccaatatcgtggacctgcacccg
gcgtccgtgtacagcatccgcatgtactcgttcaacaagatcggccgcagcgagcccagc
aaggagctcaccatcagcacagaagaggcggctcccgacgggccccccatgggtgtcacc
ctgcagccagtcacctcccagagcatccaagtcacctggaaggcccccaagaaggagctc
cagaacggagtcatccggggataccagatcggctaccgggagaacagccctggcagcaac
gggcagtacagcatcgtggagatgaaggccacgggggacagcgaggtctacacgctggac
aacctcaagaagtttgcccagtatggggtggtggtccaagccttcaaccgggctggcacg
gggccttcgtccagcgagatcaatgccaccaccctggaggacgtgcccagccagccccct
gagaacgtccgggccctgtccatcacttccgacgtggctgtcatctcctggtccgagccc
ccccgcagcaccctcaacggcgtcctcaaaggctatcgggtcatcttctggtcgctctac
gtggatggggagtggggtgagatgcagaacatcaccacgacgcgggagcgggtggagctg
cggggcatggagaagttcaccaactacagcgtccaggtgctggcctacacgcaggcgggc
gacggggtccgcagcagcgttctctacatccagaccaaagaggacgtaccaggtcccccc
gccggcatcaaggctgtcccttcctcagccagcagtgtggtggtgtcttggcttcctccc
accaagcccaatggggtgatccgcaagtacaccatcttctgctccagccccgggtctggc
cagccggctcccagcgagtatgagaccagcccagagcagctcttctaccggatcgcccac
ctgaaccgcgggcagcagtacctgctctgggtggccgccgtcacctcagccggccggggc
aacagcagcgagaaggtcaccatcgagcctgccggcaaagctccagcaaagatcatctcc
ttcggaggcaccgtgaccacgccctggatgagagatgtccggctaccttgcaattcagtg
ggagacccggcccccgctgtgaagtggacgaaggacagtgaggactcggccatcccgatg
gccctggatggccaccggctcatccactccaacggcaccttgctgctgcgcgccgtgaag
gccgaggactccggctactacacctgcacggccaccaacaccggcggctttgacaccatc
atcgtcaatcttctggtacaagtgcccccggaccagccccgcctcacggtctccaaaacc
tcagcttcatccatcaccctgacctggatcccaggtgacaacggaggcagctccatccga
ggcttcgtgctgcagtactccgaggacaacagcgaggagtggaaggacgtgctcatcagc
tccggcgagcgctccttcaagctggacagcctcaagtgcggcacgtggtacaaggtgaag
ctggccgccaagaacagcgtgggctccggacgcatcagcgagatcatcgaggccaagacc
cacgggcgggagccctccttcagcaaagaccaacacctcttcacccacatcaactccaca
cacgctcggcttaacctgcagggctggaaccacgggggctgtcccatcacagccatcctg
ctggagtaccggcccaagggcggctgggcctggcagagcctgcgggccaacagctcggca
gaggtgtttctcaccgaactgcgggaggccacgtggtacgagctccgcatgagggcttgc
aacagcgcgggctgcagcaacgagaccgcccagttcgccaccctggactacgacggcagt
accatcccacccatcaagtccgctcaaggggagggggatgatgtgaagaagctgttcacc
atcggctgcccggtcatcctggccaccctgggagtggcactgctcttcatcgtgcggaag
aagaggaaggagaagcggctgaagcggctccgagatgcaaagagtttggcagaaatgttg
ataagcaagaacaacagaagctttgacacccccgtgaagggaccgccgcagggcccgcgg
ctgcacattgacattcccagggtccagctgctcattgaggacaaggagggcatcaagcag
ctgggagatgacaaagccaccatccccgtgacggacgcggagttcagccaagccgtcaac
ccacagagcttctgcaccggagtgtccctgcaccaccccgccctcatccagagcactggg
ccgctcatcgacatgtctgacatccggccgggcaccaacccagtatccaggaagaatgtg
aaatcggcccacagcacccggaaccggtactccagccagtggaccctgaccaagtgccag
gcctccacgcctgcgcgcacgctcacctccgactggcgcaccgtgggctcccagcatggc
gtgaccgtcaccgagagtgacagctacagtgccagcctgtcccaggacacagacaaaggg
cggaacagcatggtgtccacggagagtgcctcttccacctacgaggagctggcccgggcc
tacgagcacgccaagctggaggagcagctgcagcacgccaagttcgagatcaccgagtgc
ttcatctcagacagttcttccgaccagatgaccaccggcaccaacgagaatgccgacagc
atgacgtccatgagcacgccctccgagccgggcatctgccgcttcaccgcctccccgccc
aagccccaggacgcagaccggggcaagaatgtggccgtgcccatccctcaccgggccaac
aaaagtgactactgcaacctgcccctgtatgccaagtcggaggccttcttcagaaaggca
gacggcagagagccctgcccggtggtcccgccccgagaggcctccatcaggaacctggct
cgaacctaccacccccaggcccgccacctgactctagaccctgccagcaagcccttgggc
ctcccccacccaggcgcccctgctgcggccaccacagccaccttacctcagaggactctg
gccatgccggcgcccccggcgggcacggtgctcagatcccagaagcccctgggcaagaac
atgtcatcgatgttgacccgggagctcatacccgtccacagttaa
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