Dipodomys ordii (Ord's kangaroo rat): 105980857
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Entry
105980857 CDS
T07834
Symbol
Vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04140
Autophagy - animal
dord04148
Efferocytosis
dord05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105980857 (Vps11)
04148 Efferocytosis
105980857 (Vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105980857 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105980857 (Vps11)
Membrane trafficking [BR:
dord04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105980857 (Vps11)
Hops complex
105980857 (Vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
TPR_Vps41
zf-C3HC4
zf-rbx1
Beta-prop_WDR3_1st
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR36-Utp21_1st
DUF1993
zf-RING_11
zf-HC5HC2H
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8_fungal
DLP_helical
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
105980857
NCBI-ProteinID:
XP_012865279
Ensembl:
ENSDORG00000001975
UniProt:
A0A1S3EMU8
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAAPAPGLPASKLLCLPPGITVCDSGRGSLV
FGDMEGQIWFLLRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFSAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKSQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKEYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSDFTS
RDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKTLMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPSCQANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKEPQAKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVITVCERHGEQDPSLW
EQALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETSRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGAFNKLTLLTDPPTARLTPNLEAGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgcttcgtcttcttcgacaaggagctggtgaaggag
ccgctgggtaacgatggggctgctcccggcgccgcgcctgcccccggactgcccgcctcc
aagctcctttgcctccctccgggcatcactgtctgcgactcggggcgggggagcctggtc
tttggcgatatggaaggccagatctggttcttgctgcgttccctacagcttacaggcttc
caggcctacaaactacgagtgacacacctatatcaactgaagcagcacaatattctagca
tctgttggtgaggatgaagagggtattaaccccctggtaaagatctggaacttggagaag
agagatggtggcaacccactctgtactcgaatcttctctgccatcccaggaacagaacca
actgttgtgtcttgtttgactgtccatgaaaatctcaactttatggccattggtttcaca
gatggcagtgttacattgaacaaaggagacatcacccgggatcggcatagtaagagccag
attttgcacaaaggcaactatcctgttacgggactggccttccgtcaagcagggaagacc
actcacttgtttgttgtgacaactgagaatgtccagtcctatatagtttctggaaaggag
tacccacgagtggagttggacacccacggttgtgggctacggtgctcagccctgagtgac
ccttctcaggacctgcagttcattgtggccggggacgagtgtgtctacctataccaacct
gatgaacgagggccctgcttcgcctttgagggccataagctcattgcccactggtttaga
ggataccttgtcattgtctcccgtgaccggaaggtttctcccaaatcagactttaccagc
agggactcgcagagttctgacaagcagattctcaacatctatgatctgtgcaacaagttc
atagcctacagcgctgtctttgaggatgtagtggatgtgcttgctgagtggggctccttg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaag
ctggagatgttgtttaagaagaacctatttgagatggcaattaacctggccaagagccaa
catctggatagcgatggattggcccaaatcttcatgcagtatggagaccatctctatagc
aaaggcaaccacgatggggctgtccagcagtatattcgaaccattgggaagttggagcca
tcctatgtgatccgcaagtttctggatgcccagcgcatccacaacctgactgcctaccta
cagaccctgcaccgacaatccctggccaatgctgaccataccaccctgctcctgaactgc
tacaccaaactcaaggacagctccaagttggaagaattcatcaagacaaagagcgagagt
gaagttcattttgatgtagagaccgccatcaaggtcctccggcaagctggctactactcc
cacgccctctacctggctgagaaccatgcacaccatgagtggtacctgaagatccagctg
gaggatatcaagaattaccaagaagcccttcggtacatcggcaagctgccttttgagcag
gcagagagcaacatgaagcgttatgggaagaccctcatgcaccacataccagagcagaca
acacagttgctaaagggactttgtactgactatcggcccagtctggaaggtcgaggcgat
agagaggctccaagctgccaagccaactctgaggagttcatccccatctttgcaaacaac
ccccgagagctgaaagccttcctggagcacatgagtgaagtgcagccagactcaccccag
ggtatctatgacacactgcttgagctgcggctgcagaactgggcccatgagaaggaaccg
caggccaaagagaagcttcacgcagaggccatctccctactgaagagcggccgcttctgt
gatgtctttgacaaggcgctggtgctgtgtcagatgcatgacttccaggatggggtcctt
tacctctatgaacagggaaagctgttccagcagattatgcactaccacatgcagcacgag
cagtaccggcaggtgatcactgtctgtgagcgccacggggagcaggacccctccttgtgg
gagcaggctctcagctacttcgcccgcaaggaggaggactgcaaggagtacgtggcagct
gtgctcaagcacatcgaaagcaagaaccttatgccaccccttctagtggtgcagactctg
gctcacaactctacagccaccttgtccgtaatcagagactaccttgtccaaaaactgcag
aaacagagtcagcagattgcacaggatgagctgcgggtacggcggtaccgagaggagacc
tcccgcatccgccaggagatccaagagctcaaagcgagtccgaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagttgccctccgtccatttcctgtgtggccac
tcctttcaccagcattgctttgagagttactcagaaagtgatgctgactgccccacctgc
ctccccgaaaatcggaaggtcatggatatgatccgggcccaggaacaaaaacgagacctc
catgaccagttccagcaccagctgaagtgctccaatgacagcttctctgtgattgctgat
tactttggccgaggggcattcaacaagttgactctgctgactgaccctcccacagccagg
ctgactcccaacctggaggctgggctgcagcgggacctgctcatgcactccaggaggggc
acttag
DBGET
integrated database retrieval system
