Dipodomys ordii (Ord's kangaroo rat): 105980968
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Entry
105980968 CDS
T07834
Symbol
Myo5c
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
105980968 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105980968 (Myo5c)
04131 Membrane trafficking [BR:
dord04131
]
105980968 (Myo5c)
03029 Mitochondrial biogenesis [BR:
dord03029
]
105980968 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dord04812
]
105980968 (Myo5c)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
105980968 (Myo5c)
mRNA cycle factors
P-body specific factors
105980968 (Myo5c)
Membrane trafficking [BR:
dord04131
]
Others
Actin-binding proteins
Myosins
105980968 (Myo5c)
Mitochondrial biogenesis [BR:
dord03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
105980968 (Myo5c)
Cytoskeleton proteins [BR:
dord04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
105980968 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
nSTAND3
Rnk_N
Motif
Other DBs
NCBI-GeneID:
105980968
NCBI-ProteinID:
XP_012865410
Ensembl:
ENSDORG00000003559
UniProt:
A0A1S3EN74
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIARDYGAGDKVLRLLLEDGTVRSLRNYHHGNNSG
VQRGHEQCQLRSDCSPGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAVAEEAY
KQMARNHRNQSIIVSGESGAGKTVSARYAMRYFATVSKSSSKAHVEDKVLASNPITEAVG
NAKTTRNDNSSRFGKYTEVSFDKSNQIIGANMRTYLLEKSRVVFQSENERNYHIFYQLCA
SAQQSEFKHLKLRSAEEFHYTSMGGNTVIEGVNDRADMVETQKTFALLGFKEDFQMDVFT
ILAAILHLGNVQIAGVGSERSSISEDDDHLKVFCELLGLARGKVSQWLCNRKIVTSSETV
VKPMTRAQASNARDALAKKIYAHLFDFIVEKINEALQFSGKQHTFIGVLDIYGFETFDVN
SFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDNQPVIDLIEAKMGILE
LLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPRMSNTSFIIQHFADKVEYKCEGFLEK
NRDTVYDMLVEILRESKFQLCANFFQENPVPSSPFGSMITVRSAKQIVKPNSRHFRTTVG
SKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPFEFDSKRIVQQLRACGVLETIRISAQS
YPSRWTYIEFYSRYGILMTQPELSFGDKKEVCKVVLHRLIQDSNQYQFGKSKIFFRAGQV
AYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRERHAAVTIQQYFRGQQTVRKAITARAL
KEAWAAIIIQKHCRGYLVRNLYQLIRIATITIQAYARGFLARRRYRKMLEEHKAVILQKY
ARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLEDQNRENHGLVEKLTSLAALRAGDVEK
VQRLEAELERAAIYRHSCEEKDRRYRDTVEEKLARLQKRNSELEAEQEQTQLKLREKTEE
LQEKMDALTKQLFDDVQKEERQRILLEKNFELKAQDYEKQMQCLKEEIKALKEEKMQLCH
QLEEERVTSEGLRGDVARLSKQAKTISEFEKEIELLQAQKIDVEKHVQSQKREMREKMSE
ITRQLLESYDVEDVRSRLSVEDLEHLNEDGELWFAYEGLKKATRVMENHFQSQKDCYEKE
IEALNFKVVHLSQEINQLQKLFREENDINESIRHQVTRLTSENMMIPDFKQQISELEKQK
QDLELRLNEQNEKMKGKLEELSAQLPHSREEEGTQRKAIEAQHEAHLRAKEQLLGTIQAL
QEAGEHSKAGQSEAEGENLEEELDTKDRVIKKLQDQVKNLAKTGDKANARPLSLGPKEFL
GMLEYRREDEPKLIQNLILDLKPRGVVVNMMPGLPAHILFMCVRYADALNDASMLKSLMN
SAIHGIKQVVKEQPSDIFVLSFFIFYECXYVCTQNYFQEFMKHNSPRQNKNCLNNFDLSE
YRQILSDVAIRIYHQFITVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTD
AYTITSILQQLSYFYTTMCQNGLDPELLRQAVKQIFFLIGAVTLNSLFLRKDMCSCRKGM
QIRCNISYLEEWLKDKNLQKSIAKETLEPLSQAAWLLQVKKTTDSDAKEICERCTSLSAV
QIIKILNSYTPIDDFEKRVTPSFVRKVQALLNNRGDSSQLMLDTKYLFQVTFPFAASPHA
LELIQIPSSFKLGFLNRL
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacacagtacaacagggtttggattccggatcctgaagaa
gtatggaagtctgccgagatagccagggactacggagctggtgacaaagtcctgcggctc
ctgctggaggatggcacggtgagaagcctgcggaactaccaccatggaaacaatagtggg
gtgcagaggggacatgagcagtgccagctgcgatccgactgcagccccggaatcattttg
gtggccatgaacccctacaagcagctgcccatctacggagacgccatcatccacgcctac
agcgggcagaacatgggcgatatggatccgcacatattcgcagtggcagaagaggcctac
aagcagatggccagaaaccatcgtaaccagtccattattgtgagtggagagtcgggtgca
gggaagacggtgtcagcccgctatgccatgaggtactttgccaccgtcagcaaatcaagc
agcaaggctcacgtggaggacaaggtcctagcatccaatcccataaccgaggctgtgggg
aatgctaagaccacgcgcaatgacaacagcagtcggtttgggaagtacacagaagtcagc
ttcgacaagagcaatcagatcataggggccaacatgagaacctacctgctggagaaatcc
agagttgtcttccaatcagaaaatgaacggaattaccacattttctaccagctgtgtgca
tctgcacagcagtcggagtttaaacatcttaaactaaggagtgcagaagagtttcactac
acgagcatgggaggcaatacagtcatcgagggtgtgaatgacagagcggacatggtagag
actcagaagacatttgcactcttgggtttcaaggaggattttcagatggatgttttcacc
atcctggccgccatcctgcatctgggcaacgtgcagatcgccggggtgggcagcgagcgg
tcttccatcagtgaggatgacgatcacttgaaggtattctgcgagctcctgggcctggcg
cgtggcaaagtgtctcagtggctctgcaaccgcaagatcgtcaccagctctgagaccgtg
gtgaaacccatgaccagagcccaggccagcaacgccagggacgcgctggccaaaaagatc
tacgcgcacctgttcgacttcattgtggagaaaattaacgaagccttgcagttttcaggc
aagcagcacacttttattggtgttttggacatttatggttttgagacctttgatgtgaac
agctttgaacagttctgcatcaattacgctaatgaaaagctgcaacagcagtttaacttg
catgtctttaaactcgaacaagaagaatatatgaaggaagatatcccttggactctgatc
gatttttatgacaatcagccagttattgacctgatagaagcgaaaatgggcattttggag
ttactggatgaagaatgcttgttaccacacgggactgatgaaaattggcttcaaaagctg
tataataattttgtcaacaagaactctttatttgaaaagcctagaatgtcaaacacatct
tttatcatccagcactttgctgataaggtagagtataaatgtgaaggctttcttgagaag
aacagggacactgtctacgacatgctggtggaaatcctgagagaaagcaagttccaactg
tgcgccaacttttttcaagaaaatcccgttccttcttcccccttcggttcaatgatcact
gttagatccgcaaagcagatcgtcaagcccaacagcaggcatttccggaccacagttgga
agcaagttccgcagctccctgtccttactcatggagaccctcaacgccaccacaccccac
tacgttcgctgcatcaagccaaatgatgagaagttgcctttcgagtttgactccaaaagg
attgtccagcagctgcgagcctgtggtgttttagaaacgattcgcatcagtgcccagagc
tacccatccaggtggacatacattgagttctacagccgctacggcatcctcatgacccag
ccggagctctcctttggcgacaaaaaggaagtgtgcaaggtggtcttgcacaggctcatc
caggattccaatcagtaccagtttggcaaaagcaagattttcttccgagcgggacaagtg
gcttacctagagaaactccgattggataaactgaggcagggctgtattgtgatccaaaag
cacgtccgtggctggctgcagaggaaaaagttcctccgggagagacacgctgctgtgacg
atccagcagtacttccggggccagcagactgtgaggaaagccatcaccgcaagggctttg
aaggaggcctgggcagccatcatcatccagaagcactgccgtgggtacctggtccgcaac
ctgtaccagctgatccgcatagccaccatcaccatccaggcgtatgcccggggcttcctg
gcgaggaggaggtaccggaagatgctggaggagcacaaggctgtgatccttcagaaatac
gcccgggcgtggctggcccgccgaagattccagaacatccgacgtttcgtgctcaacatc
cagctgacttacagggtccagcgtttgcagaagaagttggaggatcagaacagagagaac
cacgggctggtggagaagctgaccagcctggccgctctccgggctggcgacgtggagaag
gttcagaggctggaggcagagctggaaagagcagccatctacagacacagctgcgaggag
aaggaccggagatacagggacactgtggaagagaaactggccaggcttcagaagcgtaat
tctgaactggaagctgagcaggagcagacccagctgaagctccgcgagaagacggaagag
ctccaagaaaaaatggatgccctcaccaagcagctctttgacgacgtgcagaaagaagag
cggcaaaggatactgctggagaaaaattttgagctaaaggcacaagactatgagaagcag
atgcagtgtctgaaggaagaaatcaaggctctcaaggaggagaaaatgcagctctgtcac
cagctcgaggaagagcgggtcacctctgagggcttgaggggcgatgtggcccgactgagc
aagcaagcaaagaccatctctgagtttgagaaggagatcgagctgctccaggcacagaaa
atcgacgtggagaaacacgtgcagtcgcagaaacgggagatgagagaaaagatgtctgag
attaccagacagcttcttgagagctatgacgtcgaggatgtacgaagcagactctctgtg
gaagatctggaacatttaaatgaggatggtgaactctggtttgcatacgagggactaaag
aaggcaacacgagttatggagaaccatttccaatcccagaaggattgctacgaaaaagag
atcgaagccctgaacttcaaagtggtccatctcagtcaagaaatcaaccaactgcagaaa
ttattcagagaggaaaacgacatcaatgaaagcatccggcaccaagtcaccaggctaacg
tcagaaaacatgatgatcccagactttaaacagcaaatttcagagctagagaagcagaag
caagatcttgaactccgcctgaatgaacaaaatgagaaaatgaaaggaaaactggaggaa
ctgtcggctcagctccctcacagcagagaagaagaaggaactcagagaaaggccatagaa
gcccagcatgaagcacacctcagagcgaaagagcagcttctgggcacgatccaagcactg
caggaggctggagagcactcgaaggcagggcaatctgaagctgaaggcgaaaatctggaa
gaggagttagacacgaaggacagagtgattaaaaagctgcaagaccaagtgaagaatctg
gccaaaaccggggataaagccaatgccaggcccttgtccttgggacccaaggagttcctg
gggatgctggaatacagaagagaagacgagcccaagctcattcagaacctcatccttgac
ttgaagccccgcggcgtggtggtgaacatgatgccggggctgccggctcacatcctgttc
atgtgtgtccgctatgcagatgccctcaacgacgccagcatgctcaagtccctcatgaac
agcgccatccacggcatcaagcaagtggtgaaggaacagccctcagacatctttgttctc
tcctttttcattttctatgaatgctaatatgtatgtactcaaaattactttcaggaattc
atgaaacataacagcccccgtcagaataagaattgcctgaacaattttgacctttcagaa
tacagacagattcttagtgatgtggctatacggatatatcatcagttcattactgtaatg
gaaaataacatccaaccaataatagtgccgggcatgctggagtatgagagcctgcagggc
atctcgggcctgaagcccacgggcttccggaagcgctcgtccagcattgatgacacagat
gcctacaccatcacctccatcctgcagcagctcagctacttctacaccaccatgtgccag
aatgggctggacccggagctgctgaggcaggccgtgaagcagatattcttcctgatcggt
gctgtcaccctgaacagcctcttcctgcgcaaggacatgtgctcgtgcaggaaggggatg
cagatcaggtgcaacatcagctacttggaagaatggcttaaagacaagaatctgcagaag
agcatagccaaggaaacgctggagcccctctcccaggcagcctggttgctccaggtcaag
aagacgacggacagcgacgccaaggagatctgcgagcgctgcacctcgctgtctgccgtg
cagatcataaagatcctgaattcctacacgcccattgacgactttgagaagagagtcact
ccatcctttgtccgcaaagtacaggctctcctgaataaccggggcgactcatcacagctg
atgctggacaccaagtacctctttcaagtcacctttcccttcgcagcctctccacacgcg
ctggagctgatccagatccccagcagtttcaagctaggttttctcaaccgattgtag
DBGET
integrated database retrieval system
