Dipodomys ordii (Ord's kangaroo rat): 105981235
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Entry
105981235 CDS
T07834
Symbol
Xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105981235 (Xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105981235 (Xpc)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105981235 (Xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
zf-B_box
Motif
Other DBs
NCBI-GeneID:
105981235
NCBI-ProteinID:
XP_012865782
Ensembl:
ENSDORG00000002105
UniProt:
A0A1S3EQQ5
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MVWDDVFEVEKSKPPKRSCLSKASQAKRKRGSSDAGGPAKKKEAKATAKAENLKGVKEED
VGDGEDLRDFASDLKKMKQPKRESPVNTGSEEEDDQESEEDWEEVEELGEPVLGDMGENS
SFCQSLLPVKPVEIEIETPEQVKTRERSEKIKMEFETYLRRMMKRFSKEVHENTHKVHLL
CLLANGFYRNSICQQVDLLAIGLSIIPVRFTRVPPEDVDLSYLSNLMKWFIGTFTVNADL
SVSEGDSLQTTLERRFAVYSARDEEELVHIFLLILRALQLLTRLVVSLQPVPLKLSMAKA
KKPSSQRSTEGSRGTSEPSTHTPESHTKAKISKRAKHEGTGKAGARGKRSKAAAGSKDRR
ESSSEEEQREAKRCPHGRARRVASKVSYKEDSASDEAGSSSDFELSSGEDQQSSDEDPRP
GSKRQKRAPAPRRTKKGSESESRTPRRSHHKNLGFSAASSSSSSSKRGKKTSNDGEEAEA
GRAAGVDQWLEVFCEQEGKWVCVDCVHGVVGQPLVCHRYATKPMAYVVGFDSDGCVRDVT
QRYDPAWMTATRKCRVDAEWWAETLRPYQSPFVERERKEDLEFQAKHLDQPLPTAIGTYK
NHPLYALKRHLLKYEAIYPETAAVLGYCRGEAVYSRDCVHTLHSKDTWLKQARVVRLGEV
PYKMVKGYSNRARKARLAEPHLQDHNDLGLFGHWQTEEYQPPVAVDGKVPRNEFGNVYLF
LPCMMPIGCVQLRLPNLHRVARKLDIDCVQAITGFDFHGGYSHPITDGYIVCEEFRDVLL
AAWENEQALAEKKEKEKREKRALGNWKLLVRGLLIRERLKLRYGAKSEVVAPHMDGEGGL
SSDEEEGTSSQAETARILAASWPQNREAEEEEQKPKCHRTSRRGRKAVAAHLFPFEKL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggatgatgtctttgaagttgagaagtcaaaacctccaaagaggagctgtctc
tcaaaagcttcacaagcaaagaggaagagaggcagcagtgatgcagggggtccagcaaaa
aagaaagaggccaaggcaactgctaaggctgaaaacctcaagggagtgaaggaagaagac
gtcggcgatggagaagacctcagggactttgccagtgacctgaaaaagatgaagcagcct
aagagggagtcacctgtgaatacaggcagcgaggaagaagatgaccaggaaagcgaagag
gattgggaggaggtcgaagaacttggtgagcctgtgctaggggacatgggagaaaattca
tccttctgtcaatctcttctgcctgtgaagccagtggagatagaaatcgaaacaccagag
caagtgaaaacaagagaaagaagtgagaagataaaaatggagtttgagacatacctccgg
agaatgatgaagcgtttcagcaaggaagtccacgagaacacacacaaggttcacttgttg
tgcctgctggcgaatggattctatcgaaacagcatctgtcagcaggtcgatctgctggct
attggcctctccatcatcccagttcgctttacccgggtgccccctgaagacgtggacttg
agctatctttcaaacctcatgaaatggttcattgggacgtttacagtgaacgcagacctt
tcagtcagtgagggagacagcctgcagacgacactggaaaggaggtttgcagtctactct
gctcgtgatgaggaggagttggttcatatatttctactgattcttcgggctctacagctg
ctcactcgactggtggtgtctctgcagccagtccctctcaagttatcaatggcaaaggca
aagaaaccctctagccagagatccacagaaggttctagaggcacctcagaaccctctacc
catactccagagagccatactaaggcaaagatcagcaaaagagccaaacatgagggaact
ggcaaggcaggtgccagagggaagaggagcaaggcagctgcgggcagcaaggaccggaga
gagtcctccagtgaggaagagcagcgtgaggccaaaagatgcccacatggccgggcgcgg
cgggtggcctccaaggtctcttacaaagaggacagtgcaagcgatgaggctggcagcagc
tctgactttgaactttccagcggagaagaccagcagtcctccgacgaggatcccaggccg
ggctccaaaaggcaaaagagggccccagcgcctcggaggacaaagaaggggtccgagagt
gagtccaggaccccgcggagaagccaccacaagaatctaggcttttcagcagcatcttca
agttcttcaagcagtaagagaggcaagaaaacttccaacgatggtgaggaggcggaagcg
gggagagccgcgggcgtagaccagtggctggaggtgttctgtgagcaagaaggaaaatgg
gtgtgcgtagattgtgtgcatggggttgtgggccagcctctggtctgtcacagatatgcc
accaaaccgatggcctatgtcgtgggcttcgacagcgatggctgcgtccgtgatgtcaca
caaaggtatgacccagcctggatgacagcaacccgcaagtgccgcgttgatgcagagtgg
tgggcagaaaccttgagaccctaccagagcccatttgtggaacgggagaggaaagaggac
ctggagtttcaggccaagcacctggaccagcctttgcccactgccattggcacctataag
aaccatcctctctatgccctgaagcgacacctactgaaatacgaggccatctatccggag
acagccgcagtcctggggtattgtcgtggagaagctgtctactctagggactgtgtgcat
actctacactccaaggacacgtggctgaaacaagcaagggtggtgcggctcggagaggtg
ccctacaagatggtgaaaggctattccaaccgggcgcggaaggcccggctcgctgagccc
cacctacaggaccacaatgacctgggtctgtttggccactggcagactgaggagtaccag
ccccccgtggccgtggatgggaaggtgcctcggaatgaatttgggaatgtgtacctcttc
ctgccctgcatgatgcccatcggctgtgttcagctgaggctgcccaatctgcaccgtgtg
gcccgcaaactggacatcgactgcgtccaggccatcactggcttcgatttccatggaggc
tactcccaccccataactgatggctacatcgtctgtgaggagttcagagacgtgctcctg
gccgcctgggagaacgagcaggccctcgcggagaagaaggagaaggagaagagagagaag
cgagctctgggaaactggaagctgctggtcagaggactgctcatcagagagaggctgaaa
cttcgctatggagccaagagcgaggtagtcgctccccacatggatggggaaggcgggctc
tcttctgatgaagaggaggggaccagctcacaggcagaaacggccagaatcctggctgcc
tcctggcctcaaaaccgagaggcggaagaagaggagcaaaagcccaagtgccacaggaca
tccagaagggggaggaaagcggttgctgcccacctgttcccctttgagaagctgtga
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