Dipodomys ordii (Ord's kangaroo rat): 105981609
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Entry
105981609 CDS
T07834
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105981609 (Rbm39)
Spliceosome [BR:
dord03041
]
Common components
Common spliceosomal components
General mRNP proteins
105981609 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
105981609
NCBI-ProteinID:
XP_012866275
Ensembl:
ENSDORG00000000233
UniProt:
A0A1S3EQP1
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttataagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgcaagagaagcaaaagtaaggaacgtaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgagaaaggaagcgcagtagaagcaaagaaaggaga
cgaagccgctcaagaagtcgagatcgcagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agtagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggag
cctattgacaatctaactcctgaggaaagagatgcaaggacagttttctgtatgcagctg
gcagcaagaattcgaccaagggatttggaagaatttttctctacagtaggaaaggttcgt
gatgtaaggatgatttctgatagaaactcaagacgttccaaaggaattgcttatgtggaa
tttgtggatgttagctcagtgcctctggcaatcggattaactggccagcgagttttagga
gtgccaattatagtacaggcatcacaggctgagaaaaacagagctgcagcaatggcaaat
aatttacaaaaaggcagtgctggacctatgaggctttatgtaggctcattacactttaac
ataactgaggatatgcttcgtgggatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatctaaaggatatggttttattaccttttcagac
tcagagtgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaaggcca
atgaaagttggtcatgttactgaacgaactgatgcttctagtgctagttcatttttggat
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtctccaattaatg
gcaagacttgcagagggcacaggtttgcagattccaccagcagcacagcaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcacaacagactgaagcttcagctttagctgcagccgcctctgtccaacca
cttgcaacacagtgtttccagctgtctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagatcaaagatgatgtgattgaagaatgtaataaacatggaggtgtt
attcatatttatgtcgacaaaaattcagctcagggcaacgtgtatgtgaagtgcccatca
attgctgcagctattgctgctgttaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctgttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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