Dipodomys ordii (Ord's kangaroo rat): 105982004
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Entry
105982004 CDS
T07834
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105982004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105982004
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
105982004
SWR1 complex
105982004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
105982004
NCBI-ProteinID:
XP_012866846
Ensembl:
ENSDORG00000009881
ENSDORG00000024368
UniProt:
A0A1S3ER24
LinkDB
All DBs
Position
Unknown
AA seq
3156 aa
AA seq
DB search
MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
SGSSDGATVPLEGLSLPQAADLANKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLASSKAGSSPCLGSSSAASSPPPPASRLDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLEEPSSPSQTPSSHDSD
TRDGPEECVEEDPSQVVEVKPSPSVTQCNKQPWHPEEDDEEFTANEDEAEDEEDTIAAEE
QLEGEVDHAMELSELAREGELSMEELLQQYAGAYASDASAPGSGSSDEDEEDEDEEVDTN
SSDCEPEEATETEEAAQEDQEDSSSQSDSDEEQSEDEEDEHSEEEETSRSSESEESESDE
SEDAQSQSQVDEEEEEDDDFGVEYLLARDEEQSEADGGSGPPTPGPTTTLGPKKEITDIA
AAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLG
KTIQTISLLAHLAYEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLK
RQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQ
RRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKR
LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFM
SVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLERIDMDRFDL
IGLEGRVSRYESDTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRT
VVVVNSPRTPLGPVPLRPPPVPELSTQNTPSLTPPVLPAPLMVSASPAASSLVPASRPPG
PVLLPPLQPNSGSLPQVLPSPLGVSSGTSQPPTPTLSLKPTPPAPVRLSPAPPPGSSSLL
KPLTVPPGYTFSPVAATTTSITTATTTTTAVPAPTPAPQRLILSPEMQARLPSGEVVSIG
QLASLAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQMPSSMVNSTGVVK
IVVRQAPRDGLTPVPPLAPAPRPPGSGLPAMLTPRPTLSPGRLPTPTLGTARAPIPTPTL
VRPLLKLVHSPSPEITASAPGAAPMTISSSLHVPSSLPGPASSPIPMPNSSPLPSPVSST
VSVPVSSSLPIPVPTTLPAPTSVPLTIPISTPLPVSASGSALLTSATPALAPIVSAASGP
PPLASAGPSPSMSALTLGLAAAPALSPPQTAGHPLLLAPTSSHVSGLNSPVAPACSPVLV
PASALASTFPSAPNPAPASLLAPAPSASQTLANSMAPMTASQTAVLGPSPAPLTPLPVLA
PSPGSAPVLASPQTPLPVMAPSSVPGTPLASSSLVSAPTPVLAPASTQTMVPNPVPSPLS
SLASTQQTLALAPTLASTFSGSSPSQTHSLGTGNPQGPFPAQTLSLTPVSSLVPPAAQTL
SLAPGAPLGPTQTLSLTPAPPLAPASPMGLAPAHTLTLAPASSSASLLAPASVQTLTLSP
TSVPVPTLGTAAAQTLALAPASQASSLVGAASLPVTMANRLPVAKDEPETLMFRSGPPSP
PSTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFRLSEAHGALAPIYGT
EVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAAHQAVLFPQQRLDQLSEIIERFIFVM
PPVEAPPPSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMRTQFPDLRLIQY
DCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQA
LMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD
VHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEESSGS
SVPSALEEEEETMASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPAG
EGEEASRPGVEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVE
AARKDLDQAKEEVFRLPQEQEEGPGAGDEMSCGIGGGSHRRSKKVKAPERPGTRVSERLR
GARAENQGANHTPVTSTHHTRSTSTPSRCSPARERAPRPVPKPRPTPTLVPATIPAPVPA
PIPISAPNPVTVPIHISPSSPPPPKIPPSCSSPACTPPPTCTPPPPHTPPPVQPTLLSPS
SLVQLDLPSLPDSPPVTNPPLSLRPEPELGTQALASVETLEMAGVTNSGSSPLTLVPPKD
LLPVAVEILPVSEKNLPVIPSAPSPTLEAGSIPNGQEQEVSDPAEGPILTVLPGREELPT
SRSESNGLELPPSAASDEPLQEPLEPDRNLEELVEVRTLTSSPEKPQELVTAEVTAPSTS
SSVTSSPEDPSPARPPRRRTSADVEIRGQGTGQPGQPPGPKVLRKLPGRLVTVVEEKELV
RRRRHRAAVSTLVPGVSETSTSPGSPSTRSMSGPESSPPAGGLCETAPTSSLPTPTQPPF
IARRRIELGVTGGGSPENGERALLTITPPAVKRRRGRPPKNRSPADAGRGVDEAPSSSST
SKGKTNGADPGPGAETLIVAEPVLGPDPFHKPEPIILSPVEKRRRGRPPKARELPIPGTI
SSPGDVNLESRTQPLPLPSSLPPLPPLLAYPTATVTNTVTTVTISTSPPKRKRGRPPKNP
SSPRPSQLPVLDRDSSSVLESCGLGRRQQPLGQGESEGSSSDEDGSRPLTRLARLRLEAE
GVRGRKSEGSMVVAVIQDDLDLADSGPGGLELAPPVVSLTPKLRSTRLRPGSLVPPLETE
KVPRKRSGAPLGGSPGLTKRGRLQPPSPLGPEGSVEESEAEASGEEEDGDETSRRRPGPR
RLAGTTNQGDQRILRSNAPPHLSGPTISHRGRKAKT
NT seq
9471 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcatcctcagctcccaattctacagacacagatggtg
tcggacggcatgacaggcagcaatcctgtgtcccctgcctcatctagttccccagcctct
agtggggcaggtggcatctctccccagcacatagctcaagattcttctttggatggacct
tcaggctcctcagatggtgccacagtgcccctggaagggctcagcttaccccaggctgct
gacttggctaataagggcccaaagtgggaaaagagccatgcagaaattgcagagcaagcc
aagcatgaagctgaaattgagactcggattgctgagcttcggaaggagggattctggtca
ctgaagaggctacctaaggtgccagagcctccacggccaaaaggccactgggattatctg
tgtgaggagatgcagtggctctctgctgactttgctcaggagcgccgatggaaacggggt
gtggctcgtaaggtggtacgcatggtgatcaggcaccacgaggaacagcggcagaaagaa
gaacgggctcggagggaggagcaggccaagcttcgaagaattgcttccaccatggccaag
gatgtccggcagttctggagcaatgttgagaaggttgtgcaattcaagcagcagtcccgg
cttgaagaaaagcgcaaaaaagctttggacttgcacctagacttcattgtgggacaaact
gaaaagtactctgatcttctgtctcagagcctcaaccagccactagcttccagcaaagct
ggttcctccccttgccttggttcttcctcagctgcctctagtcctccgccccctgcttcc
cggctggatgatgaagatggggacttccaaccccaagaggaggaggaagaggatgatgag
gagactattgaggttgaagaacagcaggaaggcaatgatgcagagacacagagacgtgag
attgagctgcttcgacgtgagggagaactgccattggaagagctgcttcgttccctccca
cctcagctgctggaagagccttccagtccctctcaaaccccctcatctcatgatagtgat
acccgagatggacctgaggaatgtgttgaagaggatccctctcaggtggtggaggtaaag
ccctcaccttcagtcacacagtgcaacaaacagccttggcatccagaggaagatgatgaa
gagtttactgccaatgaggatgaagcggaagatgaagaggataccatagcagctgaggag
cagttggaaggggaggtggatcatgccatggaactgagtgaattggctcgagaaggtgag
ctatctatggaagagctactacaacagtatgcaggagcctatgcttctgatgcctctgct
ccaggctctggcagtagcgatgaggatgaggaagatgaagatgaagaggttgacactaac
agttctgactgtgaaccagaggaggcgacagaaactgaggaggcagctcaagaggatcaa
gaggatagtagcagtcagtcagactctgatgaggagcagagtgaggatgaagaagatgag
cattcagaggaggaagaaacgagcagaagttccgaatcagaagaatctgagtctgatgag
tctgaagatgcccagtcacagagccaagtagatgaagaagaggaggaagatgatgatttt
ggggtggagtacttgcttgcccgggatgaagaacaaagtgaggcagatggaggtagtggg
cctcccactccagggcctaccactactctaggccctaagaaagaaattactgacatcgct
gcagcagctgaaagtctccagcccaagggttataccttggccactacccaggtgaaaact
cccatccccctattattacggggccagctccgggaataccaacacattggactcgactgg
ctagttactatgtatgagaagaaactcaatggcattcttgctgatgagatggggctgggg
aagacaatccagaccatctccttgcttgcgcacttggcctatgagaaaggtaactggggt
ccccatttaatcattgttcccaccagtgtgatgttgaactgggagatggagctgaaacgt
tggtgccccagctttaagatcctcacttactatggagcccaaaaagagaggaagctcaag
cggcagggctggaccaagcccaatgccttccatgtgtgtattacatcttacaagctggtg
ctgcaggaccaccaggccttccgccgcaagaactggcgatatctcattctggatgaagct
caaaacataaagaacttcaagtcccagcgctggcagtctctgctcaacttcaacagccag
agacgtctactcctgacaggaactcccttgcaaaatagcctcatggaactgtggtctttg
atgcactttttgatgccccatgtcttccagtctcatcgagagttcaaggaatggttctct
aaccctctaactggcatgattgaaggcagccaagagtataatgaaggtctagtcaaacgc
ttgcataaggttttgaggccttttttgctgcgccgcgttaaagtggacgttgagaaacag
atgcccaaaaagtatgagcatgttatccgctgccgactctccaagcgccaacgatgtctc
tatgatgacttcatggcacagaccacaactaaggagacactagccacaggccatttcatg
agcgttatcaacattttgatgcagctgcgaaaagtctgcaaccatccaaatctttttgat
cctcgacctgttacctctcccttcattaccccaggcatctgtttcagcaccgcctctttg
gtgctaagggccactgatgtccatccactcgagcggatagacatggaccggtttgacctt
attggcctggagggtcgtgtctcccggtatgagtctgatacctttctgcctcgacaccgc
ctctcccgccgggtactgctagaggtagctactgctcctgaccccccgcctcggcccaag
ccagtcaagatgaaagtcaacaggatgctacagccagtgcctaagcaagaaggtcgcaca
gtggtggtagtgaatagcccacggacgccccttggccctgtcccactccgacctcctcca
gtccctgagctctcaacccaaaatactcctagcctaacgcctccagtgttgccagcgcca
ttgatggtgtctgcctcacctgctgcatcctcacttgttcctgcatcccggccccctgga
cctgttcttttgcctcctctgcagcctaacagtggttctctcccccaggtgttgccatct
cccctgggggtttcgagtggcacttcacagcctcccacaccaaccctgtccctgaagcca
actccacctgccccagttcgtttgagtccagccccacccccaggctcctctagcctactg
aaacccctcacagtacctccaggctataccttctctcctgttgctgctactaccacctct
atcaccacagcgaccactaccaccacagcagtgccagctccaactcctgcaccacagcgt
ctcatcctgtctcctgaaatgcaggctcgcctgccatccggtgaagtggtcagcattggg
cagttggcctctttggcacaacgtccagtggctagtgccgggggaagcaaacctctcacc
ttccaaatccagggcaacaaactgactttgactggtgcccaggtgcgccagcttgctgtg
gggcagccccgcccgctgcaaatgccatcatccatggtgaatagtacaggcgtggtgaag
attgtagtgagacaggcccctcgggatggactgactcctgttccaccgttggcaccagca
cctcgacctccgggttctgggcttccagctatgttgactccacgccccacattaagccct
ggcaggttacccacacctactctgggtactgctcgggctcccatacctacacccactctg
gtgaggccccttctcaagctggtccacagtccttcacctgaaatcactgcttcagcaccc
ggagctgctcccatgactatatcttcttctcttcatgtgccatcctcacttcctgggcca
gcctcgtcaccaataccaatgcctaattcctctccccttcctagtcctgtgtcgtctaca
gtgtcagtccccgtatcatcttcccttcccattcctgtccctaccacacttcctgcccca
acttctgttcccctgaccatccccatttcaacccccttgcctgtttcagcatcaggctca
gctctgttgaccagtgcaactccagcactggcacccattgtctcagcggcttctgggcca
cctccattggcatcagctgggccttccccatcaatgtcagccttgactctaggtttggcc
gcagctccagccctgtccccaccacagacagctggtcatcctctcttgttggctcccact
tcttcacatgtttcagggttgaactcacctgtggccccagcatgctcacctgtactggtg
ccagcttctgctctagccagtactttcccatcagcgccaaatccagctccagcttccctt
ctggctccagcaccttctgcatctcagactttagccaactctatggctcctatgacggct
tcacagacagcagtcctgggtccttctccagctcctctgactcctcttcctgtcctggct
ccatcgccaggctctgctcctgtcctggcttcaccgcagactccacttccagttatggct
ccgtcatcagtgccaggaacccctttagcctcatcttcactggtgtcagctccaactcct
gtgttggctccagcatcaactcagactatggtaccaaatccagttccatcgcctctctca
agcctggcttctacgcagcagacactggccctagccccaaccttagcatccactttcagc
ggctcgtctccatctcagacacactctttggggacagggaaccctcagggcccctttcca
gctcagacattgtcattgactccagtttcatccctggtaccacctgcagcccagacactg
tctttggcaccaggagcaccactgggtccaacacagacactgtctctgactccagcacct
cctctggctccagcttctcctatgggactggccccagctcacacactgactttggctcca
gcatcgtcatctgcttcactcctggccccagcttcagtgcaaacactgaccttgagcccc
acctctgttcctgtgcccaccctgggaacagctgcagctcagaccctggcactggcccca
gcttcccaggcatcttcccttgtgggtgcagcttctttgcctgtcaccatggcaaaccgg
ctgcctgttgccaaggatgagcctgagacactgatgtttcgctctggtccccccagccct
ccctccactgctacctcgttcagtggcccccggcctcgacggcagcccccaccaccacct
cgttcccctttctatctggattctctggaggaaaagcggaagcgacaacggtccgaacgc
ctggaacggattttccgacttagtgaggctcatggggccctggctcctatatatgggact
gaagtcctggatttttgtaccctgccccaacctgttgccagccccatcggccctcgttct
cctggccccagccaccccaccttttggacttatactgaggctgcccaccaggctgttctg
tttccccagcagcgactagaccagctatcagaaatcattgagaggttcatctttgtcatg
cctcctgtggaggcacctcccccttccctgcatgcctgccacccacctccttggctggcc
ccccgccaggcagccttccaggagcaattggcctgtgagctttggccccgggctcgtcct
ttgcaccgtattgtgtgtaacatgcgcacccagttccctgacttgagactcatccagtat
gactgtggaaagttgcagacattggcagtgctgttgagacagctcaaggctgagggacac
cgggtgctcatcttcacacagatgacccgaatgctggatgtattagagcagtttctcact
taccatggtcacctctacttacgtctggatgggtctactagggttgaacagagacaggcc
ttgatggaacggttcaatgcagacaaacgaatattctgcttcatcctttcaactcgaagt
gggggtgtaggcgtgaacctgacaggagcagacactgttgttttttatgacagtgactgg
aatcccacaatggatgctcaagcccaagatcgttgtcaccgaattggtcagactagagat
gtacacatctataggcttattagtgagcggacagtggaggagaacatcctaaaaaaggca
aatcagaagagaatgttaggagacatggccattgagggaggcaacttcaccacagcctat
tttaaacagcagaccatccgagagctgtttgatatgcctctggaggaatcatccggctca
tctgtaccctcggctcttgaggaagaggaggagactatggctagcaaacagacccatatt
ctagagcaggccttgtgccgggcagaggatgaagaggatattcgtgcggctacccaggcc
aaggctgaacaagtggctgaacttgcagaatttaatgagaatgatgggtttcctgctggt
gagggagaagaggccagtcgccctggggtggaggatgaggagatgtcccgtgctgagcag
gagattgctgcccttgtagaacagctgactcccattgagcgctatgccatgaaattcctg
gaagcctcattggaggaagtgagccgagaggagctcaagcaggcggaagaacaagtggaa
gctgcccgcaaagaccttgatcaagccaaggaagaggtgttccgcctacctcaagaacag
gaggaagggccaggggctggggatgagatgtcctgtgggattggtggaggcagccaccgg
cgcagtaagaaagtcaaggctcctgagaggccggggactcgtgtcagtgagcgtcttcgt
ggagcccgggctgagaatcaaggggcaaaccacactcctgtcacgtctacccatcatacc
cgtagtacctccacaccctctcgttgcagccctgccagggagcgagctcccaggccagtg
cctaaaccacgacctactccaactttagttcctgctacaattcctgccccagtccctgcc
ccaattcccatttcagccccaaatccagtaactgttcctatccatatctctccttcttcc
ccacctcctccaaagattcctccctcttgttcttctcctgcctgtacccctcctcctacc
tgtacccctccaccacctcataccccaccaccagtccaacccactctcctaagtccttcc
tctcttgtccagcttgatttgccttctcttcctgactctcccccagtcacgaatccccct
ttgagcttgaggcctgagccagaactgggtacacaagctttggcatctgtggagaccttg
gagatggctggtgtgaccaattctgggagttccccgcttactcttgtacccccgaaggat
ctgctgccagttgctgttgagatcctacctgtgtcagagaagaaccttcctgtcattcct
tctgcaccaagtccaaccctggaggctggcagcatccccaatggtcaagagcaggaagtc
tcagatcctgctgagggacccatcctcacagtactgcctggcagggaggaattgcccacc
agtcggagtgagagcaatgggctggagctcccaccttcagcagcatctgatgagccactt
caggagccactggaacctgacaggaacttggaagagctggtagaagttcggactctaacc
tccagcccagagaagccacaggaacttgttacagctgaagtcacagctccatccacctct
tcttcagtcacctcctctcctgaggatccttcacctgcccggccccctcggcgtcgcacc
agtgctgatgtggaaattaggggtcaggggactggccagccagggcaacctccaggcccc
aaagtgcttcgcaaactgccaggacggcttgtaacagtagtagaggagaaagaacttgtg
aggcgacggcgacaccgggcagctgtcagcactctagtacctggggtctctgagaccagc
accagcccaggaagcccatcaacccgcagcatgtcagggccagaatcctcacctcccgct
ggcgggctctgtgaaactgctcccacatcctcattgcccaccccaacccaaccacccttc
atagctcgtcgtcgaattgagctgggggtgactggtgggggcagcccagagaatggagaa
agggcactgctcaccatcactccccctgctgtgaaacgtcggagggggaggcccccaaag
aacaggtcgccagcagatgctggcagaggggtggatgaggctccttcatcttcatctaca
tcaaagggaaaaaccaacggggctgatccaggccctggagctgaaacgctcattgtagcc
gagcctgtcctagggcccgatccctttcacaaaccagagcccatcattctgtcacctgtg
gagaaaagaaggcgggggcgtccccctaaagcaagggaattgcccatccctgggaccatt
tcctctccaggagatgtcaatttagagagccggacacagccactcccactaccatcatcc
ctgccaccactcccaccactgctagcctatcccactgctactgtcaccaacactgtcacc
actgttaccatttcaacatccccacccaaacggaagcgaggccggcctcctaagaatcca
tcatcacctcggcccagccagctccctgtcttggaccgtgacagctcttctgtccttgag
agttgtggattgggaaggcggcagcaacccctgggccaaggagagagtgagggtagttcc
tctgatgaggatggaagccgtcccctcactcgcctggcccgcctgcggcttgaagcagaa
ggggtgcgaggacgaaagagtgaagggtccatggtggtggctgtaattcaggatgacctg
gatctagcagatagcgggccaggcgggttagaactggcacctcctgtggtctcattaacc
cccaaattgcgttcgacccggctgcgtccagggtctctagtccccccactagagactgaa
aaggtgcctcgcaaacggtcaggggctccccttggtgggagtcctgggctaacaaagcgg
ggtcgtctgcagcccccaagtcccctggggcctgagggttcagtagaggagtctgaggct
gaagcctcaggtgaggaagaagacggggatgagacctcacgccgcaggcccggcccccgc
aggcttgctgggaccaccaaccaaggggaccagcgcatcctacgcagcaatgctcctccc
cacctgtctggccctaccattagtcacagaggccgaaaggccaagacgtga
DBGET
integrated database retrieval system
