Dipodomys ordii (Ord's kangaroo rat): 105982132
Help
Entry
105982132 CDS
T07834
Symbol
Ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04612
Antigen processing and presentation
dord05145
Toxoplasmosis
dord05152
Tuberculosis
dord05164
Influenza A
dord05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
105982132 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
105982132 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
105982132 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
105982132 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
105982132 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dord01001
]
105982132 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dord04054
]
105982132 (Ciita)
Enzymes [BR:
dord01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105982132 (Ciita)
Protein kinases [BR:
dord01001
]
Serine/threonine kinases: Other
TAF1 family
105982132 (Ciita)
Pattern recognition receptors [BR:
dord04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
105982132 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
AAA_16
LRR_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
105982132
NCBI-ProteinID:
XP_012867052
Ensembl:
ENSDORG00000002265
UniProt:
A0A1S3EUG5
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MRCLAPCPLGPHLPEPQGSGQPGTMEVGLPEGGYLELLNSDTDPLCLYHICDQMDLAGEE
IELCSEADPETINCDQFTRLLCDVEEDEEAGEAYANIAELDQYVFQDSQMEGLSKDIFIE
HIGLDEGTCESVEVPAEVGKRNQKRSLPEEQPLDPKRRKPAETPAVPILTGSFLVGPVGS
NSPLLCPSPALFSQEPVPGQAPLEGAVQLTALPSGSSMNCFHLSAGPFQFISTLPALPQG
CWQISESGTNISGIFIYHGDIPQASQVFPCPGPPVQSLPKSPERPGSTSPFAPSTADLPS
MPEAALTSRAGVTEDDMSPSPHQGAAEVSVSLPKWPGPVEQFCRSLRDRYQAEPAGLDGL
LVDVDLVRARLEKGSNKSQERELATLDWAERQPAHGGLAEVLLSTRDRRQPRETHVIAVL
GKAGVGKSHWARAVSRAWACGQLPQYDFVFHVPCHCLDRPGTTYRLQDLLCPAGLHAQAL
DDRILSHIVRRSNHVLLILDGFEELEAQDGSCGPVCSEPCSFRGLLAGLFQGKLLRGCTL
VLTARPRGRLAQCLSKADALFEVPGFSAEQALTYLRRYFEDTGATEDQERALVLLREQPF
LSSHGHNPAVCQAVCQLSKVLLRAGAEAQLPCTLTGLYVGLVGPAARDSPPGALASLAEL
AWELGRRHQSTLREDQFPSAEVRTWAVARGLVRAAPGAVEAGLAFASFPLHCFLGALWLA
QSSDIKDKKLPQYLALTPRKKRPYDNWLAGAPRFLVGLLFQPRARCLGALLGPAAAAATG
ADRKRKVLTRYLKRLQPGKLQAARVLELLHCAHEAQDPGIWQHVLQGLPEHLSFLGTRLT
PPDAHLLGRALESAGRDFSLDLRSTGLDPSGLGSLVGLSCVTRFRAALSDTTGLWESLRR
RGETPLLCAAEEKFTIEPFKAKSLKDVEDLGHLVQTPRVTRCSDDPARDLPAVRDLKKLE
FALGPVLGAQAFPKLARILPAFSSLQHLDLDSLSENKIGDEGVAQLSATFPWLKALETLN
LSQNSITDVGACQLADALPALAATLLRLSLYNNCICDKGAESLARVLPDMESLRVMDVQY
NKFTAVGAQQLAASLRKCPHLHTLAMWTPTIPFGVQEHLQQLDSRISLR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcctggctccatgccctctggggccccacctgcctgaaccccaaggcagtggg
cagccaggcaccatggaggtgggcctgccagagggcgggtacctggagcttctcaacagt
gacacagaccccttatgcctttaccacatctgtgaccagatggacttagctggagaagag
atcgagctgtgctcagaagccgatccggaaaccatcaactgcgaccagttcactaggctg
ctgtgtgatgtagaagaggatgaagaggctggggaggcttacgccaacattgcggaactg
gaccagtatgtgttccaggactcccagatggagggcctgagcaaggacattttcatagag
cacattggactagacgagggaacatgtgagagcgtagaggtgccggccgaagtgggaaag
cgaaatcagaaacgatccctcccggaggagcagcccctggacccgaagcgcaggaagcca
gctgagacacctgctgtgcccatcctgactggcagtttcctggtagggccagtagggagc
aactctcccctgctctgcccatcacctgctctgttcagccaggaaccagtaccaggccag
gcacccctggagggagctgtccaactgacagcgctcccctccggatcctccatgaactgc
ttccatctttctgccggacctttccagttcatctcaactctccctgccctgccccagggg
tgctggcaaatttcagagtctggcacaaacatctccgggatatttatctatcatggtgac
ataccccaggccagccaggtatttccttgccctggtcctcctgttcagagcctcccaaag
tccccagagcggccaggctccaccagcccctttgctccatccacggccgacctgcccagc
atgcctgaagcagcgctgacctcccgtgcaggtgtgacagaggatgacatgtcgccctcc
ccacaccaaggggctgcagaggtctctgtcagtctcccaaaatggcccgggcccgtggag
cagttctgccgctctctccgggacaggtaccaggctgagcctgcgggcctggatggcctc
ctggtggacgtggacctggtgcgggccaggctggagaagggcagcaacaagagccaggag
agggagctggctaccctggactgggcagagcgacagccggcccacgggggtctggccgag
gtgctgctgtccaccagagaccgccgacagccgcgagaaacgcacgtgatcgccgtgctg
ggcaaagccggcgtggggaagagccactgggcccgggcagtgagcagggcctgggcgtgc
ggccagctcccccagtacgacttcgtcttccacgtcccctgccattgcctggaccgtccg
gggaccacgtaccgcctgcaggatctgctctgccccgcgggcctgcacgcacaagccctg
gacgacaggatcctcagccatattgtgaggcggtccaaccatgtcctgctcatcctggat
ggcttcgaggagctcgaagcgcaggacggctcgtgtggacccgtgtgctccgagccctgc
tccttccgcgggctgctggccggcctgttccaggggaagctgctgcggggctgcacgctg
gtcctcacggcgcggccccggggccgcctggcgcagtgcctgagcaaggccgacgccctg
ttcgaggtgcccggcttctccgccgagcaggctctgacttacctacggcgatactttgag
gacacgggggcgaccgaggaccaggagagggccctggtgcttctgagggagcagccattt
ctctccagccacgggcacaaccccgccgtgtgccaagccgtgtgccagctctccaaagtg
ctgctgcgggcgggcgccgaggcccagctgccctgcacgctcacgggactctacgtgggc
ctggtgggccccgccgccagggacagccccccgggggccctggccagcctggccgagctg
gcctgggagctgggccgcaggcaccagagcaccctgcgggaagaccagttcccctcggcc
gaggtcaggacgtgggccgtggcccggggcttggtgcgggccgccccgggcgctgtggag
gccgggctggcctttgccagcttcccgctgcactgcttcctgggggccctgtggctggcc
cagagcagcgacatcaaggacaagaagctgccgcagtacctggcgctcacacccaggaag
aagagaccctatgacaactggctggccggcgccccgcgcttcctcgttggcctcctcttc
cagcctcgcgcccgctgcctgggagccctgctggggccggccgccgccgccgccaccggg
gcggacaggaagcggaaagtgctcacgaggtacctgaagcggctccagcccgggaagctg
caggcggcgcgggtgctggagctgctgcactgcgcccacgaggcacaggaccccgggatc
tggcagcacgtgctgcaggggctccccgaacacctctccttcctgggcacccggctcacg
ccccccgatgcccacctgctgggcagggccttggagtccgcaggccgagacttctccctg
gacctccgcagcactggccttgacccctcgggcctgggcagcctcgtgggactctcctgt
gtcacgcggttcagggccgccttgagtgataccaccgggctgtgggagtcgctgcggcgg
cgtggggagaccccgctactctgtgcggcggaggagaaattcaccatcgagcccttcaag
gccaagtccctgaaggacgtcgaggacctgggccacctggtgcagaccccgagggtgaca
cgttgctccgacgacccggccagggacctgcctgccgtccgagacttgaagaagctggag
tttgcattgggccccgtcctgggtgcccaggccttcccgaagctggcgaggatccttccc
gccttctcttcccttcagcatttggacctggactccctgagcgagaacaagatcggggac
gagggcgtcgcgcagctctcggccaccttcccatggctgaaggcgctggagacgctcaac
ctctcccagaacagcatcaccgacgtgggcgcctgccagctggcggacgccctgcccgcc
cttgccgccaccctcctgaggctcagcttgtacaataactgcatctgtgacaaaggagcc
gagagcctggcacgcgtgctccccgacatggagtccctgcgggtgatggatgtccagtac
aacaagttcacagctgtgggtgcccagcagctggccgccagcctgaggaagtgcccccac
ctgcacacgctggccatgtggacacctaccattccctttggcgtccaggaacatttgcag
caactggactcgcggatcagcctgagatga
DBGET
integrated database retrieval system
