Dipodomys ordii (Ord's kangaroo rat): 105982242
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Entry
105982242 CDS
T07834
Symbol
Ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dord03037
]
105982242 (Ift88)
Cilium and associated proteins [BR:
dord03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
105982242 (Ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_8
TPR_6
TPR_19
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
ARM_TT21_4th
TPR_CcmH_CycH
ARM_TT21_5th
TPR-S
TPR_15
ARM_TT21_N
TPR_21
HAT_PRP39_C
HEAT_Nup120
ARM_TT21_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
105982242
NCBI-ProteinID:
XP_012867248
Ensembl:
ENSDORG00000001573
UniProt:
A0A1S3ETK1
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTGFQQAVRTSHGRRPPVTAKIPSTA
VTRPIATGYGSKTSLASSLGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRMERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGILKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
MAPNLKAGYNLILSYFAIGDREKMKKAFQKLIAVPLEIDEDEKYISPSDDPHTNLLIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAITYLRQRDFNQSVDTLKMLEKKDSRVKSAAATNLSGLYFLQNEFSQASSYADLAVNS
DRYNPSALTNKGNTVSANGDHEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRLDEALD
CFLKLQAILRNDAQVLYQIANVHELMKDPSQAIEWLMQLISVVPTDSKVLAKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
IASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKKLEKM
KEIKEQRIKSGRDGSGGSRSKWEGSTGNDSGQNSSANSKGERLSAKLRTLPGTNEPYESS
SNKEIDASYVDPLGPQIERPKTAAKKRGDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctggcaccagagacagatgaagatgatctgtattctggttat
aatgactacaacccaacctatgatactgaggaattggaaaatgatacaggttttcagcaa
gcagtgagaactagtcatggcagaagacctcctgtaactgctaaaataccaagcacggca
gttactagacctatagctactggatatgggtccaagacatccctggcatcatccttggga
agaccaatgacaggggctattcaggatggagttactcgacctatgacagcagtgagagca
gctggttttaccaaagcagcactgagaggctctgcatttgatccccttggtcagtcacgg
ggaccagctcctcccttggaagccaagaatgaagatagtccagaagaaaagattagacaa
ttagagaaaaaagtaaatgagttggtagaagaaagctgtattgcgaatagttgtggagac
ttaaaattggccttagaaaaagctaaagatgcaggaagaatggaaagagtcttagtgaga
caacgagaacaagttacaactccagagaatatcaatctggatttaacttactcagttctt
ttcaacttggccagtcagtattcagctaatgaaatgtatactgaagcattaaacacatat
caagttatagtgaaaaataagatgttcagcaatgcaggaatattgaaggtgaatatggga
aatatttatttaaagcaaagaaattactccaaagctattaagttctaccgaatggcttta
gatcaaatcccaagtgtccataaagaaatgaggataaaaataatgcagaacattggcgtt
acatttattaaaacgggtcagtattcagatgccattaattctttcgaacacattatgagc
atggcgccaaatctgaaggcaggctacaacttaatcctcagttattttgccatcggagat
cgagaaaaaatgaagaaggcattccagaaattgattgctgtaccgttagaaattgatgaa
gatgagaaatacatttcaccaagtgatgatccccatactaacttactgattgaagctata
aaaaatgatcatctcaggcaaatggaacgtgagaggaaagccatggcagaaaaatatatc
atgacagctgcaaaactcattgcacctgtaattgagacatcttttgctgtaggttatgac
tggtgtgtggaagtagtgaaagcttctcaatatgtagagctagccaatgatctggaaata
aacaaagccattacatacttaaggcaaagggattttaaccaatctgtagataccttaaaa
atgttggaaaaaaaagacagtagagtgaaaagtgcagctgcaactaacctctcaggcctg
tattttctgcaaaatgaattttcccaagccagcagctatgcagatttagctgtgaactct
gacagatataacccatcagctctgactaataaagggaatacagtttctgcaaatggtgat
catgagaaggctgctgaattctataaagaggctctaagaaatgattcttcttgtactgaa
gcactttacaaccttggccttacctataagaagctaaaccggctagatgaggctttggac
tgtttcctgaaacttcaagcaatcttgagaaatgatgcccaagttctttaccaaatagca
aatgtacatgaattaatgaaagatccgagtcaagctattgaatggttgatgcagctgatc
agcgttgttccaacagattctaaagttctagccaagctgggagaattgtatgatagtgaa
ggagacaagtcacaagcgttccaatattactatgagtcgtacagatatttcccttctaac
attgaagtcattgagtggcttggagcatattatattgacactcagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatg
attgctagttgtttcagaagaagtggtaactaccagaaagcattagatacttacaaagat
attcacagaaaatttccagaaaatgttgaatgtctgcgtttcttggttcgtctctgcaca
gatattggattaaaagaggttcaagaatatgccacaaaactcaagaagttggaaaaaatg
aaagaaataaaggaacagcgcatcaagtctggcagagatggcagtgggggctcccgaagc
aaatgggaggggagcactggcaatgatagtggccagaacagtagtgccaatagtaaaggt
gaacgactaagtgccaaactcagaactttacccgggacaaatgaaccttatgaaagtagc
agtaacaaagaaatagatgcttcctatgtggatccacttggcccacagatagaaagacca
aaaactgctgccaagaaaagaggcgatgaggatgattttgctgatgaagagctaggagat
gatttgcttccagaataa
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