Dipodomys ordii (Ord's kangaroo rat): 105982636
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Entry
105982636 CDS
T07834
Symbol
Prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105982636 (Prpf39)
Spliceosome [BR:
dord03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105982636 (Prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
105982636
NCBI-ProteinID:
XP_012867741
Ensembl:
ENSDORG00000009461
UniProt:
A0A1S3ETK7
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MQNSHMEEYKNSNNGSTGNNSSEVEQSADFSTEIMNVTEMEQSPDGSPNVNPSTEENEMA
NAVDLPVTVTETEANFPPEYEKFWKTIENNPQDFTGWVYLLQYVEQENHLMAARKAFDKF
FIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLEPGD
PETNSTVRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDA
IKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEENILSCFDKAIHGSLAIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQ
DTLKRKAENGSEEPEEKKAHMEDTPSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggaagagtacaaaaattctaacaatggcagcacaggcaacaac
agttcagaggtagaacagtctgctgattttagcactgagattatgaatgttacggaaatg
gaacagtcacctgatggttctcccaatgtgaacccatcgacagaagaaaatgaaatggcc
aatgctgtggaccttccagtgacagtgacagaaacggaagcaaatttccctccagaatat
gaaaaattttggaaaactatagaaaataatcctcaagattttacaggatgggtatatttg
cttcagtatgtagaacaagagaatcacttgatggctgccaggaaagcatttgacaagttt
ttcatacactatccttattgctatggttactggaaaaagtatgcagaccttgaaaagcga
catgacaacattaaacaatcagatgaggtttatagacggggacttcaggcaatacctctt
agtgttgacctttggatacattatataaacttcttaaaagaaacgttggaacctggtgat
cctgagacaaacagtacagtaagaggaacttttgagcatgctgttctagctgcaggaaca
gatttccgatctgacagactgtgggaaatgtatataaactgggaaaatgaacaaggaaat
ctgagagaagttacagctatatatgatcgtattcttggtatcccaacacagctttatagt
caccattttcaaagatttaaagaacatgtacagaataacttgcccagggatcttttaact
ggtgaacagtttattcagctgcgaagggaattagcttctgttaatggacatagtggagat
gatggtccacctggtgatgatttaccatcaggaattgaagacataactgatccagcaaag
ctaattactgaaatagagaacatgagacacagaatcattgaaattcaccaagaaatgttt
aattataatgaacatgaagttagtaaacggtggacatttgaagaaggtattaaaagacct
tattttcatgtgaaaccactggaaaaggcccaactaaaaaactggaaagaatatttagaa
tttgaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcata
tcatgtgccctctatgaggaattttggattaagtatgccaagtacatggaaaaccatagc
attgaaggagtgaggcatgtcttcagcagagcgtgtactattcatctcccaaagaaaccc
atggtgcatatgctttgggcagcttttgaggaacagcagggtaatattaacgaagccagg
aatattttgagaacatttgaagaatgtgttctaggattagcaatggttcgcttgcgaaga
gtaagtttagaacgacggcatggaaacatggaagaagctgagcatttgcttcaagatgcc
attaagaatgccaagtcaaataatgaatcatcattttacgctatcaaactagcccgacat
cttttcaaaatacaaaaaaatcttccaaaatcaagaaaggtgcttttggaagccattgaa
agagataaagagaacaccaagttgtacctcaatttacttgaaatggaatatagtggcgac
ctcaaacaaaatgaagaaaatattctaagttgttttgacaaagctatacatggttcatta
gctattaaaatgagaattacattctctcagagaaaagtggaatttcttgaagattttggt
tcagatgttaataagcttctgaatgcttatgatgaacatcaaacactcctcaaagaacaa
gatactttaaaacgcaaagcagaaaatggatcagaagaaccagaagaaaagaaagcacac
atggaagatacaccatcatctacacagatgattgatggtgatttacaggcaaatcaagct
gcatataattatagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattatcctcctcctccaacctga
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