Dipodomys ordii (Ord's kangaroo rat): 105982891
Help
Entry
105982891 CDS
T07834
Symbol
Taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105982891 (Taf1c)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
105982891 (Taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
105982891
NCBI-ProteinID:
XP_012868077
Ensembl:
ENSDORG00000003552
UniProt:
A0A1S3EXB7
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MDFPSPLRPAFFMTGPLGMTDIPDLSFMCSWRDALTLPESPLPCSKGGALPPAQDLLWEP
ALPGPVPLLPPGPDPWDPGLTARDLLFRGANPYRRQPRAVLDITEQLSHFLWDHGDVAFT
PLGKLMLENFKLEGNRSRSKKVTVVSVKNLVRDLSGHQPWGCPWAYLTHRQRRFSILGGP
VLSRTVSSLLGRLLREELALKWEQLMLDEAFTGGALAWLPGRTVGTGQLVYPTGGALDRL
YLHEVSLASAGDPQVLGDPGCIQLRGPVRQVVTSTVQGETLLAVRSDYHCAVWKVGRQGR
PAPLQVVQVEKGATGVSLSPHLPGELAVCSRSGAVCLWTPQDGLQQIYKDSDTLVFRDLS
PWRWADFTAHPRVLTVGDRTGVKMIDTQAPPGCGLMLFRGGAEASCQKGERVLLVQYLGQ
TDGGSLPPTLHLVCTQFSLYLVDERLPLVPMMKWDHGLASPPLLARLLPPPGPSCPQPLL
LGGQGGQLQLLHITGDGTSPPRLAAHPQSLPSCTDSLSAFPLLEPKSHQQLQERLEAPTI
GLSATIPPPCGSTPILSVFQLSAAGDIFYQHLRLQTACSLRDEGPPGSPGPHRLPAGAAS
HPQDHAPTPSWDAQATAHCSRWMEALLQVPRVPRTWTAPTFSHRHLLGRLELQQSAGKTT
ERLRAAMAEGRLLRRGDLGPLPAAEPPPAPQPGPQDQLTERLGEAWEGRGAAWWGRQQDK
VSGPKKQAKRAKRRTQLSSTFSQSSCIDHPDSPGGPTPSPSEAAPRPPVTPPSQASLSGP
WLPRAPLERRQRLRDQVARLPPEDTPKQATVPLSQQTPGLTSSQPPRKKPRMGF
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagccccctccgcccagccttcttcatgactggcccccttggcatgact
gatattcccgacttgtcattcatgtgcagctggagagatgccctgaccctcccagagtcc
cctctcccctgctccaagggtggggcgctccccccggcccaggacctgctgtgggagccg
gcgctgccaggacccgtccccctgctgcctcccggccccgacccctgggaccctggcctg
acagcccgtgacctccttttccgaggcgcgaacccctatcggaggcagccccgggctgtg
ctggacattactgagcagctcagccacttcctgtgggatcatggggacgtggccttcacc
ccgctggggaagctgatgctggagaacttcaagctggagggaaaccggagccgctctaag
aaagtgacggttgtcagcgtgaagaacctggtccgggacctcagcggacaccaaccctgg
gggtgtccctgggcgtacctcacccaccggcagcgccgcttctccatcctcgggggtccc
gtcctcagcaggacggtctcgagcctgctggggcgtctgctgcgggaggagctggccctg
aagtgggagcagctaatgctggacgaggccttcaccgggggcgccctggcctggctgcct
ggcaggactgtgggcactgggcagctggtctaccccaccgggggcgccctggacaggctg
tatctccacgaggtcagtttggcttccgccggtgacccccaggtcctaggggaccctgga
tgcatccagctccggggacctgttcggcaggttgtcacctccaccgtccagggagaaaca
ctgctggctgtccgctccgactaccactgtgccgtgtggaaggtgggcaggcaggggcgg
cccgcccctttgcaggtggtccaggtggagaagggtgccaccggggtcagtctcagcccc
cacctgccgggggagctggccgtgtgcagccgctccggagccgtgtgcctctggacgccc
caggacgggctacagcagatctacaaggactcggacacgctcgtgttccgggacctctcg
ccctggcgctgggcagacttcacagcccaccctcgggtgctcaccgtgggtgaccgcacc
ggtgtgaagatgatcgacacacaggcacccccgggctgcgggctgatgcttttccgaggg
ggggcagaggcttcctgccagaaaggggaacgtgtgctgctcgtccagtacctgggccag
acggacggcgggtctctcccgcccacgctgcatctcgtctgcacccagttctccctctac
ctggtggacgagcgcctccccctggtgccgatgatgaaatgggaccacggcctggcctcc
ccgcccctgctggcccgcctgctgcctcctcctggccccagctgcccgcagcccctgctt
ctggggggccagggggggcagctgcagctgttgcacatcacaggagacgggacctccccg
ccccggctggccgcacacccgcagtccctgccctcctgcaccgactccctgtctgccttt
cccctgctggagcccaagagccatcagcagctgcaagagcgcctggaagctccaactata
ggcctgtctgccaccatcccaccaccctgtggctccacgcccatcctgtcagtcttccag
ctctcggccgccggggacatcttctaccaacacctccgcctgcagacggcctgcagcctc
cgcgatgaggggcctccaggcagcccggggccccaccgccttcctgcgggcgcggcctct
caccctcaggaccatgcgcccacaccgtcctgggacgcccaggccactgcccactgcagc
cggtggatggaggccctgctgcaggtaccccgtgtaccccgtacgtggactgcacccacc
ttttcccaccgccacctactggggcgcctggagctgcagcagagcgcagggaagaccacg
gagcgcctgcgggcagccatggccgaggggcggctgctgcggcgcggggacctgggcccc
ctccctgctgcagaaccgccccccgccccccagccaggccctcaggaccagctcaccgag
cgtctgggggaggcctgggaaggccggggtgctgcctggtgggggagacagcaggacaag
gtttcggggcccaagaaacaggccaagcgggccaagcgccggactcagctgtccagcacc
ttctcacagagcagctgcatagaccacccggacagccccggcggccccaccccgagcccc
tcggaggccgcgccacggcccccagtgacgccaccctcccaggcatccttgtcgggaccc
tggttaccccgcgccccgttggagcggcggcagcgcctccgggaccaggtggccaggctg
ccgcccgaggacacccccaaacaagccacggtgcccctctcgcagcagacgcctggcctt
accagctcccagcctccccggaagaagccgcgcatgggattctga
DBGET
integrated database retrieval system
