KEGG   Dipodomys ordii (Ord's kangaroo rat): 105982937
Entry
105982937         CDS       T07834                                 
Symbol
Ctcf
Name
(RefSeq) transcriptional repressor CTCF
  KO
K23195  transcriptional repressor CTCF
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dord00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dord03000]
    105982937 (Ctcf)
   03036 Chromosome and associated proteins [BR:dord03036]
    105982937 (Ctcf)
Transcription factors [BR:dord03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    105982937 (Ctcf)
Chromosome and associated proteins [BR:dord03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    105982937 (Ctcf)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_16 zf-H2C2_5 zf-C2H2_jaz Actin_micro zf-C2H2_REST Zf-C2H2_ZNF451_C zf-C2H2_7th_ZNF462 zf-C2H2_ZN142 zf-met zf-C2HE zf-C2H2_6 zf-C2H2_15 A24_N_bact zf-WIZ
Other DBs
NCBI-GeneID: 105982937
NCBI-ProteinID: XP_012868114
Ensembl: ENSDORG00000000111
UniProt: A0A1S3EVZ2
LinkDB
Position
Unknown
AA seq 677 aa
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKKNAEPDLDDNEDDEEPAVEIEPEPEPQPVTPAPPPAKK
RRGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATD
APNGDLTPEMILSMMDR
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggaaggtgaggcagtcgaagccattgtggaagagtctgaaactttcattaaaggaaag
gagagaaagacttaccagcgacgccgggaaggtggccaggaagaagatgcttgccaccta
ccccagaaccagacagatgggggtgaggtggtacaggatgtcaacagcagtgtacagatg
gtaatgatggaacagctggatcctacccttcttcaaatgaagactgaagtaatggagggt
acggtggctcccgaagcagaggctgcagtggacgatacacaaatcataaccttgcaagtt
gtaaatatggaggaacagcccattaatataggagagcttcagcttgttcaagtacctgtt
cctgtgactgtacctgttgctaccacttcggtagaagaacttcagggggcttatgaaaat
gaagtgtctaaagagggccttgcagaaagtgaacccatgatatgtcacacattacctttg
cctgaagggtttcaggtggtgaaagtgggggccaatggagaggtggagacactagagcaa
ggtgaacttccacctcaggaagatccaagctggcagaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctatgattttgaagaagagcagcaggaaggcctgctgtcagaagtt
aatgcagagaaagtggttggtaatatgaagcctcccaaaccaacaaaaattaaaaaaaaa
ggtgtaaagaagacattccagtgtgagctgtgcagttatacatgtccacggcgttcaaat
ttggatcgtcacatgaaaagccacactgatgaaagaccacataaatgccatctctgtggc
agggcatttagaacagtcaccctcctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgaccagtggagaattagtgcggcat
cgtcgttacaaacatacccatgagaagccatttaagtgttccatgtgtgattatgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcatactggagagcgcccgttccag
tgcagtttgtgcagttatgccagcagggacacatacaagctgaaaagacatatgagaaca
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccaaagtggt
actatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcattgtccc
cactgtgacactgtcatagcccgaaaaagtgacttgggtgtccacttgcggaagcagcat
tcctatattgagcaaggcaagaaatgccgttactgcgatgctgtgtttcatgagcgttac
gccctcattcagcatcagaaatcacacaagaacgagaagcgctttaagtgtgaccagtgt
gattatgcttgtagacaggagaggcacatgatcatgcacaagcgcacccatactggggaa
aagccttacgcctgcagtcactgcgacaagaccttccgccagaaacagctcctcgatatg
catttcaagcgctaccatgaccctaacttcgtccctgcggcctttgtctgttctaagtgt
gggaaaaaaaatgctgagccagatctggatgacaatgaggatgatgaggaacctgcggta
gaaattgaaccagagccagagcctcaacctgtgaccccagccccaccacctgccaagaag
cggagaggaagaccccctggcagaaccaaccagcccaaacagaaccagccaacagccatc
attcaggttgaagaccagaatacaggtgcaattgagaacattatagttgaagtcaaaaaa
gagccagatgctgagcctgcagaaggggaggaagaggaggcccagccagctgccacagat
gcccctaatggagacctcacacctgagatgatcctcagcatgatggaccggtga

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