Dipodomys ordii (Ord's kangaroo rat): 105983025
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Entry
105983025 CDS
T07834
Symbol
Katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dord04812
]
105983025 (Katnb1)
Cytoskeleton proteins [BR:
dord04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105983025 (Katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
eIF2A
WDR54
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_LRRK2
Beta-prop_NWD2_C
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
105983025
NCBI-ProteinID:
XP_012868217
Ensembl:
ENSDORG00000013099
UniProt:
A0A1S3EXP4
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVAQDPVQDSRNLTQQLPNPSIPLRRIYERPSTTCSKPQRVKHNSESERRS
PSSEEEREERESQAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDTATAKEASKP
SPPMDVQVPVPNLEVPSRPPVITPTPAPKSEPAIIPATRNEPIGLKASDFLPAVKIPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCYKQLKSISGLVKTKSSLSGRHGSAFRELHLLMASLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctgtggtcaccaagacggcttggaagttgcaggagattgtcgcccatgcc
agcaatgtgtcctctctggtgctgggaaaggcctctgggcgactgctggccacgggaggg
gatgactgtcgcgtcaacctgtggtctatcaacaaacccaactgtatcatgagcctcaca
ggtcatacatcccctgtggagagtgtccgcctcaacactcctgaggagctcatcgtggct
ggttcccaatcaggctccatccgtgtctgggacctggaagctgccaaaattctgcgcaca
ctcatgggacacaaagccaacatctgcagcctggatttccacccttatggcgagtttgta
gcctccggttcccaggacacaaatatcaagctctgggacatcaggagaaaaggctgtgtc
ttccggtacaggggacacagccaggctgtgcggtgtctgaggttcagccctgatgggaag
tggttggcatcagctgcagacgaccacacagtgaagctctgggacctgactgctggcaag
atgatgtccgagttccctggtcacacagggcctgtcaatgtggtggaatttcaccccaac
gagtatctcctggcctctggcagctctgacaggacaatccgcttttgggacctagagaag
ttccaggtagtgagctgcattgaaggggagccagggcctgtaaggagtgtgctcttcaac
cccgacggctgctgcctgtacagtggctgccaggactcgctgcgggtgtacggctgggag
cccgagcgctgctttgatgtggtcctcgtcaactggggcaaggtggctgacctagccatc
tgcaatgaccagctgataggtgtggccttctcccagagcaacgtctcctcttacgtggtg
gacctgacgcgtgtcaccaggacaggcacggtggcccaggaccctgtgcaggacagccgg
aacctgacccagcagctgcccaaccccagcatccctctccgtcgcatctacgagcggccc
agcacgacctgcagcaagcctcagagggtgaagcacaactcagagagtgagcggcgtagc
cccagcagtgaggaggagcgggaggagcgcgagtcccaggctgagatccagaatgccgag
gactacaacgagatcttccagcccaagaacagcatcagccggacgccaccccggaggagt
gagcccttcccagcacccccggaggatgacacggccacggcaaaggaggcctcaaagccc
agccctcccatggacgtgcaggttccggtgccaaatcttgaggtcccatcacggccccca
gtcatcacccccacaccagctcccaaaagtgagcctgccatcatccctgccacgaggaat
gagcccattgggctgaaggcctctgacttcctgccggctgtgaagatccctcagcaggcc
gagctggtggatgaggatgccatgtcccagattcgcaaaggccacgacaccatgtgtgtg
gtgctcaccagccgccacaagaacctggacacagtgcgggctgtgtggaccacaggtgac
atcaagacgtcggtggactctgcggtagccatcaatgacctgtctgtggtcgtggacctc
ctgaacatcgtcaaccagaaggcctccctgtggaagctggacctgtgcactacagtgctg
ccccagatcgagaagctcctgcagagcaagtatgagagctacgtccagacaggctgcacc
tccctgaagctgatccttcagcggtttctgcccctcatcactgacatcctggcagccccg
ccctctgtgggggttgacatcagccgcgaggagaggctgcacaagtgccggctctgctac
aagcaactcaagagtatcagtggcctcgtcaagaccaagtcaagcctgagcggccgccac
ggcagtgccttccgggagctgcacttgctcatggccagtttggactga
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