Dipodomys ordii (Ord's kangaroo rat): 105983101 Help Entry 105983101         CDS       T07834                                  Symbol Sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord03040   Spliceosome Brite KEGG Orthology (KO) [BR:dord00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105983101 (Sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dord03021]     105983101 (Sf3b3)    03041 Spliceosome [BR:dord03041]     105983101 (Sf3b3)    03036 Chromosome and associated proteins [BR:dord03036]     105983101 (Sf3b3) Transcription machinery [BR:dord03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      105983101 (Sf3b3) Spliceosome [BR:dord03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     105983101 (Sf3b3)  Complex B     105983101 (Sf3b3)  Complex C    U2 SnRNP specific factors     105983101 (Sf3b3) Chromosome and associated proteins [BR:dord03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      105983101 (Sf3b3)     TFTC complex      105983101 (Sf3b3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  105983101 NCBI-ProteinID:  XP_012868322 Ensembl:  ENSDORG00000014176 UniProt:  A0A1S3EY05 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaatttaaccttgcagcgagctactggtatcagctttgccattcatggc aacttctctggaaccaaacaacaggaaattgttgtttcccgtggaaagatcttggaactt cttcgtccagacccgaacactggcaaagtacatactcttctcactgtggaagtgttcggt gtaatacgatcactcatggcctttagactgacaggtggcaccaaagactacattgtagtt ggcagtgactcaggtcggattgttatcttggaataccagccatccaagaatatgtttgag aaaattcaccaagaaacttttggcaaaagtggatgtcgccgcattgttccaggccagttc ttggctgtggatccaaaaggacgggctgttatgattagtgccattgagaaacagaaattg gtgtatatcttgaacagagatgcagcagcccggcttaccatctcatcacccttggaggcc cacaaagcgaacactttagtatatcatgtagttggagtagatgtgggttttgaaaaccca atgtttgcctgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca gcagctaatacccaacagacacttactttctatgagttggaccttggtttaaatcatgtg gtccgaaaatacagtgaacccctggaggaacatgggaacttccttattacagttccagga gggtcagatggtccgagtggagtgttgatttgctctgaaaattatatcacctacaagaac tttggtgatcaaccagatatccgatgtccaattcccagaagacggaatgatctggatgac cctgagagaggaatgatttttgtctgctctgctacccataagaccaagtcgatgtttttc tttttggcacaaactgagcagggagacatcttcaaaatcactttggagacagatgaagat atggtaactgagatacggctgaaatattttgatactgtgcctgttgcagctgccatgtgt gtgcttaaaacaggtttcctttttgtggcatcagaatttggaaatcattacttatatcaa attgcacatcttggagatgatgatgaagaacctgaattttcatctgctatgcctctggaa gaaggagacacattcttttttcagccaagacctctcaaaaatcttgttctggtagatgaa ttggacagcctctctcccattttgttttgccagatagctgatttggctaatgaagacact ccccagctgtatgttgcttgtggcaggggaccccggtcatctctgagagtcttgaggcat ggacttgaggtatcagaaatggctgtttctgaactacctggtaaccccaatgctgtctgg acagtacgtcggcacattgaagatgagtttgatgcctacattattgtttctttcgtgaat gccacccttgtactttctattggagagactgtagaagaagtgactgactctgggttcctg ggtaccaccccaaccttgtcttgctccttgttaggagatgatgctttggtgcaggtgtat ccagatggcattcggcacatacgagcagacaagagagtcaatgagtggaagactcctggg aagaaaacgattgtaaaatgtgcagtgaaccagcgacaagtagtgattgctctgacagga ggagagctggtctattttgagatggacccctcaggacagttgaatgagtacacagaacgg aaggagatgtcagcagatgtggtgtgcatgagtctggccaacgtacctcctggagagcag cggtctcgcttcctggctgtaggtctggtggacaacactgtcagaatcatctccctggat ccctcagactgtttgcaacctttgagtatgcaggctctcccagcccagcctgagtccttg tgtattgtggaaatgggtggaactgagaagcaggatgagctgggtgaaagaggttctatt ggtttcctgtatctgaacattgggctgcagaatggtgtgctgctgagaactgtcctagat cctgtcactggggacttgtctgacacccgcactaggtacctggggtctcgtcctgtgaag ctcttccgggtccgaatgcaaggccaggaggcagtattggccatgtcaagccgctcctgg ttgagctattcttaccaatctcgctttcatctcacacccctctcttatgagaccttggag tttgcatctggctttgcttctgaacagtgtcctgagggcattgtggccatttccactaac actctgaggattttggcattggagaagctaggtgctgtcttcaatcaagtagccttcccg ttgcagtacacacccaggaaatttgtcatccatcctgaaagtaacaaccttataatcatt gagacagaccacaatgcctatactgaggccacaaaagctcagagaaagcagcagatggca gaggaaatggtggaagcagcaggggaagatgagcgggagctggctgcagagatggcagca gcatttctcaatgaaaaccttcctgaatccatttttggagctcccaaggctggcaatggg cagtgggcctctgtgatccgagtgatgaatcctattcagggaaacacactggaccttgtt cagctggagcaaaatgaggctgcttttagtgtggctgtgtgcaggttctccaacactggt gaagactggtatgtgctggtgggcgtggccaaggacctgattctgaatcctcgatctgtg gcagggggctttgtatatacatacaagcttgtgaacaatggggaaaaactagagtttttg cataagacgccagtggaggaagtccctgctgccattgccccattccagggaagggtgttg attggtgtgggaaagcttttgagagtctatgacctggggaagaagaagttactccgaaag tgtgagaataagcatattgctaactacatatctgggatccagactattggacacagggta attgtatctgacgtccaagaaagttttatctgggttcgctacaagcgtaatgaaaaccag ctcatcatctttgctgatgacacctacccccgatgggtcactacagctagtctccttgac tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtaaggctcccccct aataccaatgatgaagtagacgaggatcccacaggaaacaaagccctgtgggaccggggc ttgctcaatggtgcctcacagaaggcagaggtgattatgaactaccatgttggggagacc gtgctatcactacagaagaccacgttgatcccaggaggctcagaatcacttgtttatacc accttgtcaggcggaattgggatcctcgtcccattcacatcccatgaggaccatgacttc tttcaacatgtagaaatgcaccttcggtctgagcatcctcctctctgtgggcgagaccac ctcagctttcgttcctattacttccctgttaagaatgtgattgatggagacctctgtgag cagttcaactccatggagcctaataagcaaaagaatgtgtctgaagaattggaccgaacc cctccagaagtatccaagaaacttgaggatatccggacccgctatgctttctga

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