Dipodomys ordii (Ord's kangaroo rat): 105983241
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Entry
105983241 CDS
T07834
Symbol
Brip1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03440
Homologous recombination
dord03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105983241 (Brip1)
03460 Fanconi anemia pathway
105983241 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105983241 (Brip1)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105983241 (Brip1)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105983241 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
105983241 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
Motif
Other DBs
NCBI-GeneID:
105983241
NCBI-ProteinID:
XP_012868538
UniProt:
A0A1S3EVU7
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MIVWTVAVFDCPPLGVGALTAGYDWLLASWSSQLIGCLNSLGDWALGAEGWEAGIRLGLR
CEGRKSAAAAAGNREIVRGLNSRQHCLLESPTGSGKSLALLCSALAWQQSLTGKPVDEGV
SKKAEAPLSCCCSCHSKSSIHSDMSPGTSPHFNTSATERHDSSSACQDSPGKNTLAAKLS
AKKQASEYREENDDFQVEKKRIRPLETAQQMRKRQCFEKEVPHLDAEVASGKTVKLNSPL
QKINSFSPRKHPGHCSKCCCSTKQGNNQDSSDTIKKDHGGKSKRPKIYFGTRTHKQIAQI
TRELRRTAYSGVPMTILSSRDHTCIHPEVVGNFNRNEKCMELLDGKNGKSCYLYHGVHKV
SDQSALQNVHGMYKAWDIEELVKLGKKLKACPYYTARELKDDADIIFCPYNYLLDAQIRE
TMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDGLVNSNIRKKNHEPLR
AVCYSLINWLEENSKHLVERDYESSCKIWSGNEMLLNLHKMGITSTIFPILQGHFSAILQ
KEEKILAFQDKEETREVPIISASTQIMLKGLFMVLDYLFRENSRFADDYKIAIQQTYSWI
NHTDIPDKNGLLVVPKNKKRSRQKIAVHVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSP
MKSFSSELGVTFTVQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGAL
LLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWQNLELMKTVIVEPQGGEKTDFDQLL
QVYYDAIKYKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQ
YNDHYSQLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALLLVDDRFNNNPSRYTSG
LSKWVRQEIQHHSTFESALESLAEFAQKHQNVTKSPKKNRKSIQDNESTPKGACLEDRPH
MYLLETANHLPQETPREDEAKIRIQELPSAKVITENMSSQSNMITRKEKNDSVLLEESVQ
TLQAEQVISRSSSPTFNKQTKKGSWSTFYSLRKCFTDNIETATPELRSSENCSSSTYKTE
KVEENTVLPLTDECEFSDLTVSASLGPCPQQEITISSIKKDVIEGNNSKQLLCSDKALDP
DTPLSLVSKQDKYPSSAEALEEEAEDESIYFTPELYDPVDEDEENELKETDRLSNNSDCI
LAEDLFEIGTLTGVVSERKAEXCTGTKLNSSLHTEER
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgtggacagttgcagtttttgactgccccccgttgggtgtcggcgcgctaact
gcgggctacgattggctgcttgcttcctggtcttcacagttgattggttgcttgaactcg
ctcggcgattgggcgctgggagccgaggggtgggaggcgggaattcgtttgggactgcgt
tgtgaggggcggaagagcgctgcggcggcggcggggaatcgcgagattgtcagaggactg
aacagtaggcagcactgtttgttggagagccccacaggcagcgggaaaagcttagccttg
ctttgttctgctttagcctggcaacagtctcttacagggaagccagtggatgaaggcgtg
agtaagaaagcggaagcaccactgtcatgctgctgttcatgccactcaaagagttctata
cacagtgacatgagccccggaacttcaccgcatttcaacacatcagcaacggaaagacat
gacagttcatcagcctgtcaagactctcctgggaaaaacactctggctgcaaagttatct
gccaagaaacaggcatctgaatacagagaagaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaacagcacagcagatgaggaaacgtcagtgttttgaaaaggaa
gtaccccatttggatgcagaagttgcttcaggaaagactgtaaaactcaactctccatta
caaaagataaattccttttctccacggaagcatcctggtcactgttctaagtgctgctgt
tctactaaacaaggaaacaatcaagattcttcagataccattaagaaggaccatgggggg
aaatccaagagacccaaaatatattttgggacacgcacacacaaacagattgctcagatt
actagagagctccggaggacagcttattcaggggtgccaatgactattctttccagcaga
gatcatacttgtatccatcctgaagtagttggtaacttcaacagaaatgaaaagtgcatg
gaattactggatggcaaaaacgggaaatcctgctatttgtatcatggtgttcataaagtt
agtgatcaaagtgctctacagaatgttcatgggatgtacaaagcttgggatatagaagaa
cttgtcaaactaggaaaaaaactaaaggcatgtccctattacacagctcgagaactaaaa
gatgatgcagacataatattttgtccttacaactatcttctagatgcacaaataagggaa
actatggatataaatctgaaagaacaagttgtcattttagatgaagctcataacattgaa
gactgtgctagggagtcagcaagttacagtgtcacagaagttcagcttcggtttgctcga
gatgaactagatggcttggtcaacagtaatataaggaagaaaaaccacgaacccctacga
gctgtatgctacagtcttattaattggttagaagaaaactctaaacatcttgtagaaaga
gactatgaatcatcttgtaaaatatggagtggaaatgaaatgctcttaaatttgcacaag
atgggtatcacttctactatttttcctattttgcagggacatttttctgctattcttcaa
aaggaagaaaaaatcttagcatttcaagataaagaggagacaagagaagtacccattatt
agcgcttcaactcaaataatgctcaaaggactttttatggtgcttgactatcttttcagg
gaaaatagcagatttgcagatgattataaaattgctattcaacagacttattcctggata
aatcatactgatattccagataaaaatggattattggttgtaccaaaaaacaagaagcgt
tcaagacagaaaattgcagttcatgtgctaaacttttggtgtttaaatcctgccgtggcc
ttttcagatattaatggcaaagttcggacgattgttttgacatccggaacattatcacca
atgaaatctttttcatctgagcttggtgttacatttactgtccaactagaggctaatcat
gtcattaataactcacaggtttgggttggtaccattggttcaggccctaagggtcggaat
ctctgtgctaccttccagcatactgaaacatttgagttccaggatgaagtgggagcactt
ttgttatctgtctgccagactgtgagccaaggaattttgtgttttttgccatcttacaag
ttactagaaaaattaaaagaacgctggctttcaactggtttatggcaaaatttggaactg
atgaaaacagtcattgtagaacctcaaggaggagaaaagactgattttgatcaactactt
caggtgtactatgatgcgatcaagtacaaaggagagaaagatggagcccttctcatagca
gtttgtcggggcaaagtgagtgagggtcttgatttctcagatgacaatgcccgtgctgtg
ataaccataggaattccttttccaaatgtgaaagatctacaggttgaactcaagcgacaa
tacaatgaccactactcacaattgagaggtcttttgccgggccgtcagtggtatgaaata
caagcatatagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgg
ggagctcttcttctagtagatgaccgcttcaataataacccaagtcgctacacatccgga
ctttctaaatgggtaagacaagagattcagcaccattcaacctttgagagtgcgctggag
tccttagctgaatttgctcaaaagcaccaaaatgtcactaagtcacccaaaaagaacagg
aagagtatacaagacaatgagtctactcctaaaggggcctgtttggaagacagaccccat
atgtatttattggaaacagcaaaccatctaccacaagaaactcctagggaagatgaagca
aaaatacgtatccaggaactgccaagtgccaaagtgatcactgaaaatatgtcttcacaa
agcaacatgatcaccagaaaggagaaaaatgattcagttttactggaagaatctgttcaa
acactgcaagcagagcaagtgatttctcgatcctcaagcccaactttcaacaaacaaacc
aagaaaggtagctggtctactttttattctttgagaaaatgttttactgataacatagag
actgcaacacctgagctcaggtcctcagagaattgttctagttctacctacaaaacagaa
aaagtggaagagaacactgttttgccactcactgatgaatgtgagttctcagatttaaca
gtaagtgcatcgttggggccatgccctcaacaagaaatcactatttcatcaataaagaaa
gatgtcattgaaggaaataattcaaaacaactgctatgctctgataaagccctggatcca
gatactcctttgtctctagtaagcaaacaagataaatatcccagttccgctgaagctttg
gaagaagaagctgaagatgagtctatatatttcacacctgaactttatgatcctgtagat
gaagatgaagaaaatgagctcaaggaaactgataggcttagtaataattcagattgcatt
ttagctgaagacctttttgaaattggaactctaactggagtggtcagcgaaaggaaagct
gagngttgcacaggcacaaagttgaattcaagcttacatactgaagaaagataa
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integrated database retrieval system
