Dipodomys ordii (Ord's kangaroo rat): 105983471
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Entry
105983471 CDS
T07834
Symbol
Polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03020
RNA polymerase
dord03420
Nucleotide excision repair
dord05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105983471 (Polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
105983471 (Polr2a)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
105983471 (Polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105983471 (Polr2a)
03400 DNA repair and recombination proteins [BR:
dord03400
]
105983471 (Polr2a)
Enzymes [BR:
dord01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105983471 (Polr2a)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105983471 (Polr2a)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105983471 (Polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105983471
NCBI-ProteinID:
XP_012868806
Ensembl:
ENSDORG00000008667
UniProt:
A0A1S3EWL2
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagttctgagtccagatgagctgaaacggatgtctgtgacagagggaggt
ataaaatacccagagaccaccgagggaggtcgtcccaagcttggggggctgatggatccc
aggcaaggagtgattgagcggactggccgctgccagacatgtgcaggaaacatgacagag
tgcccaggccactttggccacattgaactggccaagcctgtatttcatgtgggcttcctg
gtgaagacaatgaaggtcttgcgctgtgtctgcttcttctgctccaaactgcttgtcgat
tcaaacaatcctaagatcaaggacattctggccaagtccaagggacagcccaagaagcgg
ctcacacacgtctacgacctttgcaagggcaaaaacatctgcgagggaggggaggagatg
gacaacaagttcggtgtggaacagcctgagggtgatgaggatctgaccaaagagaagggt
catggtggttgtgggcggtaccagccccgaattcggcgctcaggcctggaattgtatgct
gaatggaaacatgtgaatgaagactctcaggagaagaagattttgctgagtccagagaga
gtgcatgagatcttcaagcgaatctcagatgaggagtgttttgtgctaggcatggagccc
cgctatgctcggcctgaatggatgattgtcacagtgttgccagtgcccccactctctgtg
cggcctgctgtggtgatgcagggctctgctcgaaatcaggatgacttgacccacaaactg
gctgacattgtgaagatcaacaatcagctgcggcgcaatgagcagaacggagcggctgcc
catgtcatcgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat
gaactgcccggcttgccccgtgccatgcagaagtccggacgccccctcaaatccttgaag
cagcgtctaaagggcaaggaaggccgggtgcgagggaacctgatgggcaagcgagtggac
ttctcagcccgcactgtcatcactcccgaccccaacttgtccattgaccaagttggcgtg
cctcgctccattgctgccaacatgaccttcgcggagattgtcaccccctttaacattgac
agactacaggaactagtgcgcagagggaacagccagtacccaggagccaagtatatcatc
cgagacaatggtgatcgaattgacctgcgtttccaccccaaacccagtgaccttcacctg
cagactggctataaggtggaaaggcacatgtgtgatggagacatcgttatcttcaatcgt
cagccaactttgcacaaaatgtccatgatggggcatcgggttcgcatcctcccttggtct
acttttcgtctgaatcttagtgtgacaactccatacaatgcagactttgatggagatgag
atgaacttgcacctgccacagtctctggagactcgggcagagatccaggaattagccatg
gtgcctcgaatgattgtcaccccccaaagcaatcgacctgtcatgggtattgtgcaagac
acactcacggcagtacgcaaattcacaaagagagacgtctttctggagcggggtgaagtg
atgaacctcctaatgtttctgtctacatgggatgggaaagtcccacagccagctatcctt
aagccccggcccctgtggacaggcaaacagatcttctccctcatcatacctggccacatc
aattgtatccgtacccacagcacccatcctgatgatgaagacagtggcccttataaacat
atctctcctggggataccaaggtagtggtggagaatggggagctgatcatgggaattctg
tgtaagaagtctcttggtacctcagctggctccctggtccatatctcctacctagagatg
ggccatgacatcactcgcctcttctactccaacattcagactgtcattaacaactggctt
ctcattgaaggtcataccattggcattggggactctattgctgattctaagacttaccaa
gacattcagaacactattaagaaggccaaacaggatgtaatagaggtcattgaaaaggct
cataacaatgagctggagcccactccaggaaacacactgcgtcagacatttgagaatcag
gtgaatcgcattctcaatgatgccagagacaaaactggctcctctgcccagaaatctctg
tctgaatacaacaactttaagtctatggtggtgtctggtgctaaaggttccaagatcaac
atctcccaggtcattgctgttgtagggcagcaaaacgtggagggcaaacggatcccattt
ggattcaagcaccggactctgcctcacttcatcaaggatgattatgggcctgagagccgt
ggttttgtggagaactcctacttggctggcctcacacccaccgagttcttcttccatgcc
atgggagggcgtgagggtctcatcgacacagctgtcaagactgctgagactggctatatc
cagcggcggctgatcaagtccatggagtctgtgatggtaaaatatgatgcaactgtgagg
aactccatcaaccaggtggtgcagctgcgctatggcgaggatggtttggcaggcgagagt
gttgagttccagaacctggccacgcttaagccttctaacaaggcttttgagaagaagttc
cgctttgattataccaatgaaagggccctgcggcgcactctgcaggaggatctggtaaag
gatgtgctgagcaatgcacatatacagaatgagctggaacgagaatttgaacgaatgcgt
gaggatcgagaagtgctcagggttatcttcccaactggtgacagcaaggttgtccttccc
tgtaacctcttgcgcatgatctggaatgctcagaaaatcttccacatcaaccctcgtctt
ccctctgacctgcaccccatcaaagtagtagagggagtcaaggaactgagtaagaagtta
gtgattgtgaatggggatgaccccctaagtcggcaggctcaggagaatgccacattgctc
ttcaatatccacttacggtccacactgtgttcccgccgtatggctgaggagtttcggctt
agtggagaggcttttgactggctgctcggggagatagagtccaagttcaaccaagccatt
gcccatcctggggaaatggttggagctttggctgcacagtctcttggagagcctgccact
cagatgaccttgaacaccttccactatgctggtgtgtctgccaagaatgtgactctaggt
gtgccccgactcaaagagctcatcaatatttccaagaagccaaagactccttcgcttact
gtcttcctgctcggccagtctgctcgagatgcggagagggccaaggacattctgtgccgc
ctggagcatacaacattgaggaaggtgactgccaacacagccatctactatgaccctaac
ccccagagcaccgtggtggcagaagaccaggaatgggtgaatgtctactatgagatgcct
gacttcgatgtggcccgaatatctccctggctgttgcgtgtagaactggaccggaagcac
atgactgacaggaagctgaccatggaacagattgcagaaaaaattaatgctggttttggt
gatgacttgaattgcatctttaatgatgataatgcagagaagctggtccttcgtatccgc
attatgaacagtgatgagaacaagatgcaagaggaagaagaggtggtggacaagatggat
gatgatgtttttctacgctgcattgagtctaacatgctgacggatatgactctgcagggc
atcgagcagattagcaaggtgtacatgcacttgccgcagacagacaacaagaagaagatc
atcatcacagaggatggagagttcaaggccctgcaggagtggatcctagagacggatggc
gtaagcttgatgcgggtgctgagtgagaaggatgtggaccctgtacgcaccacatccaat
gacattgtggagatcttcacggtgctgggcattgaggccgtgcggaaagccctggaacgg
gagctgtaccatgttatctcctttgatggttcttatgtcaattaccggcatttggctctc
ttgtgtgataccatgacctgtcgtggccacttaatggccatcactcgacatggagtcaac
cgccaggacaccggaccgctcatgaaatgctccttcgaggagacggtagacgtgcttatg
gaagcagctgcccatggggaaagtgaccccatgaagggagtctctgagaatatcatgctg
ggccagctagctccagctggcactggctgttttgacctcctgcttgatgcagagaagtgc
aagtacggcatggagatccccaccaatatccccggcttgggggctgctggacctactggc
atgttcttcggctcagcacccagtcccatgggaggaatctctcctgccatgacaccctgg
aaccagggtgcaactccagcctatggtgcctggtctccaagtgttgggagtgggatgact
ccaggggcagccggtttctctcccagtgctgcttctgatgccagcggcttcagcccaggg
tactctcctgcctggtctcccacgccaggctccccaggctccccaggcccctccagccca
tacatcccctcaccaggtggtgctatgtctcccagctactcgcctacgtcacctgcctat
gagcctcgctcccctgggggctatacaccccagagtccttcatactccccgacttcgccc
tcctactctccgacctcgccatcctattctccaaccagtcccaactatagccccacgtca
cccagctactcgccgacctcacccagctactcgccgacctcacccagctactcgccgaca
tcacccagctactcaccgacgtcacccagctactcaccaacgtcacccagctactcgccg
acatcacccagctactctcccacttcacccagctactccccaacatctcccagctattca
ccaacatctcctagttactccccaacatcacccagctactcccccacatcacctagctac
tcaccgacgtctccaagctattcgcccacatccccaagctactcaccaacttccccgagc
tactcacccaccagcccgaactactctccaaccagtcccaattacaccccaacatcaccc
agctacagcccaacgtcccccagctactcacctactagcccgaactatacaccaacaagc
cccaactacagcccaacctctccaagctattccccaacttcgcccagctactccccgacc
tcaccaagctattcgccttcaagcccacggtataccccacagtctccgacctacacccca
agctctcccagctacagccccagctctcccagctacagccctacttcacccaagtacacc
ccaaccagcccttcctacagccccagctcaccagagtacaccccaacctctcccaagtac
tcacctaccagccccaagtattcacccacttctcccaagtattcgcctacaagccctact
tactcgcccaccacccccaagtactcaccaacatctcccacttactcaccaacctctcca
gtctacaccccaacctcccccaagtactcgcctactagtcccacctactcccctacttct
cccaagtactcccccaccagccccacctattcgcccacttcccccaaaggctctacctac
tctcccacttctcctggctactcgcccaccagccccacctacagcctcaccagccctgcc
atcagccccgatgacagtgatgaggagaattga
DBGET
integrated database retrieval system
