Dipodomys ordii (Ord's kangaroo rat): 105983653
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Entry
105983653 CDS
T07834
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105983653 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dord04121
]
105983653 (Trim54)
Ubiquitin system [BR:
dord04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105983653 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
PHP
Sina_RING
DUF349
UvrD_C
FlgN
COG2_C
DUF5799
DUF1421
Zn_ribbon_FGT1_2
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
105983653
NCBI-ProteinID:
XP_012869070
Ensembl:
ENSDORG00000010142
UniProt:
A0A1S3EYT8
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTAVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFRPGAAGEDEDEEVAFDGDDGNAGLEEERPSAS
ESLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccgtgggtttcaagccgctgctcggggatgcgcacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgcaaacgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccactgctgtgtcatcaggcggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggatcgacatggagtctatggcctgcagcgaaacctgcta
gtggagaacattattgatatttacaagcaggaatcctccaggccactgcactccaaagcg
gagcagcatctcatgtgtgaggaacatgaggatgaaaagatcaacatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggggcccacaaggactgtgaagtg
gcaccactgcccaccatttacaaacgccagaagagcgagctcagcgacggcatcgcgatg
ctggtggcgggcaatgaccgagtgcaagcagtgatcacgcagatggaggaggtgtgccag
accatcgaggacaacagccgcaggcagaagcagttgttaaaccagaggttcgagaccctg
tgcgccgtgctggaggagcgcaagggcgagctgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgtgtccgcggcctcatccgccagtatggagaccacctggaggcctcc
tccaagctggtggagtcggccatccagtccatggaggagccccaaatggcgctctacctc
cagcaggccaaggaactgatcaataaggtcggggccatgtcgaaggtggagctggcgggg
cggcccgagccgggctacgagagcatggagcagttctcggtgagcgtggagcacgtggcc
gaaatgctgcggaccattgacttccggcccggagcagccggggaggacgaggatgaggag
gtggcgttcgacggggacgacggtaacgcgggcctcgaggaagagcggccgagcgcatca
gaaagcctgcactga
DBGET
integrated database retrieval system
