Dipodomys ordii (Ord's kangaroo rat): 105983692
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Entry
105983692 CDS
T07834
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105983692 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105983692 (Sf3b1)
03036 Chromosome and associated proteins [BR:
dord03036
]
105983692 (Sf3b1)
Spliceosome [BR:
dord03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105983692 (Sf3b1)
Complex B
105983692 (Sf3b1)
Complex C
U2 SnRNP specific factors
105983692 (Sf3b1)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105983692 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
105983692
NCBI-ProteinID:
XP_012869161
Ensembl:
ENSDORG00000002399
UniProt:
A0A1S3EXL7
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDV
MREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKL
SSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPG
HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRK
SRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDER
NRPLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKS
VNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAA
LRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKIL
VVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVV
ASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLV
DEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIP
LMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFF
KHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKI
MGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGT
VLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILG
ALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREW
MRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVA
IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLED
ALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALE
GLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTY
IRYELDYIL
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aaaaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggagatttatggtggaagtgacagccgatttgctggatatgtgacatcaattgctgca
acagaacttgaagattatgatccgtttgctgagcaccgacccccaaagattgccgaccgg
gaagatgaatataaaaagcacagacggaccatgataatatccccagagcgtcttgatcct
tttgcagatggagggaagacccctgatcctaaaatgaatgctagaacttacatggatgta
atgcgagaacagcatttaactaaagaagagagagaaattaggcagcagctagcagaaaaa
gctaaagctggagaactaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaa
cgaaaacggcgttgggatcaaacagccgatcagactcctggtgccactcctaaaaaacta
tcaagttgggatcaagcagagactcctgggcataccccttccttgagatgggatgaaaca
ccaggtcgcgcaaaaggaagtgagactcctggagcaacgccaggctcaaaaatttgggat
cctacacctagtcatacacctgcgggagctgctactccgggacgaggcgatacaccaggc
catgcaacaccagggcatggaggcgcaacttccagcgctcgtaaaaacagatgggatgag
acccccaaaacagagagagatactcccgggcatggaagtggatgggctgagactcctcga
acagatcgaggtggagattcaattggtgaaacacctactcctggagccagcaaaagaaag
tcacgttgggatgaaacaccagctagtcagatgggtggaagcactcctgttctgacacct
ggaaaaacaccaattggcacaccagccatgaatatggctactcctactccaggtcacata
atgagcatgactcctgaacagcttcaggcctggcgatgggaaagagaaattgatgagcga
aatcgtccgctctctgatgaagaattggatgctatgtttccagaaggatataaggtactt
ccccctccagctggttatgttcctatacgaactccagctcggaagctgactgcaactcca
acacctttaggtggtatgactggtttccacatgcaaactgaagatagaaccatgaaaagt
gttaatgaccagccgtctggaaatcttccgtttttaaaacctgatgacattcaatacttt
gacaaactattggttgatgtggatgaatcaacacttagtccagaggagcaaaaagagaga
aaaataatgaagttgctgttaaaaattaagaatggaacacctccgatgagaaaggctgca
ttgcgtcagattactgataaagctcgtgaatttggagctggacctttgtttaatcagatt
cttcctctactgatgtctcctacacttgaggatcaagagcgtcatttacttgtgaaagtt
attgatagaatattatacaaacttgatgacttagtacgaccgtatgtgcacaagattctt
gtggtcattgaaccactgttgattgatgaagactactatgctagagtggaaggcagagag
attatttctaacttggcaaaggcagctggtctggctactatgatttctaccatgagacct
gatatagataatatggatgagtatgtccgtaacacaacagctagagcttttgctgttgta
gcctctgccctgggcattccttctttattgcccttcttaaaagctgtatgcaaaagcaag
aagtcttggcaagcaagacacactggtattaagattgtacagcagatagctattcttatg
ggctgtgccatcttgccacatctgagaagtttagttgaaatcattgaacatggtcttgtg
gatgagcagcagaaagttaggaccatcagtgctttggctattgctgccttggctgaagca
gcaactccttatggtatcgaatcttttgattctgtgctcaaacctctatggaagggtatc
cgtcaacacagaggaaagggtttagctgctttcttaaaggctattggatatcttattcct
ctcatggatgcagaatatgccaactactatactagggaagtgatgttaattctcattcga
gaattccaatctcctgatgaagaaatgaagaaaattgtactgaaggtggtaaaacagtgt
tgtgggacagatggtgtagaagcaaattacataaaaacagagattcttcctcctttcttt
aaacacttctggcagcacagaatggctttagatagaagaaattaccgacagttggttgat
actactgtggagttggcaaataaagtaggtgcagcagaaattatatccaggattgtggat
gatctgaaagatgaagctgagcagtaccggaaaatggtgatggagacaattgagaaaatt
atgggcaacttgggagcagcagatattgatcataaacttgaagaacaacttattgatggc
attctttatgctttccaagaacagactacagaggactcagtaatgttgaatggctttggc
acagtggtcaatgctcttggcaaacgagtaaaaccatacctgcctcagatatgtggtaca
gtattgtggcgtttgaataacaaatcagcaaaagttaggcaacaggcagctgacttgatt
tctcgaactgctgttgttatgaagacatgccaagaggaaaagctgatggggcacttgggt
gtggtgttgtatgaatatttgggtgaagagtaccctgaagtattgggcagcattcttgga
gcactgaaggctattgtaaatgtaataggtatgcataagatgactccaccaattaaagat
ctgctgcctagactcacccctatcttaaagaacagacatgaaaaagtacaagagaattgt
attgatcttgttggacgtattgctgacaggggagctgagtatgtgtctgcaagagaatgg
atgaggatttgctttgagcttttagagctcttaaaagcacataaaaaagctattcgtaga
gccacagtcaacacatttggttatattgcaaaggccattggccctcatgatgtattggct
acacttttaaacaaccttaaagttcaggaaaggcaaaacagagtctgtaccactgtagca
atagctattgttgctgaaacgtgttcacccttcacagtactccctgccttaatgaatgaa
tacagagttcctgaactgaatgttcaaaatggagtattaaaatcactctcattcttgttt
gaatatattggtgaaatgggaaaagactacatttatgctgtaacaccattattggaagat
gctttaatggatagggaccttgtacacagacaaacagcaagtgcagtggtacaacacatg
tcacttggggtttatgggtttggttgtgaagattctctgaatcacttgttgaactacgta
tggcccaatgtgtttgagacatctccccatgtaatccaagcagttatgggagccctggag
ggtctgagagttgctattggaccatgtagaatgttacagtattgtctacagggtctgttt
catccagctcggaaagtcagagatgtgtattggaaaatttacaactccatctacattggt
tcacaggacgctctcatagcacattacccaagaatctacaatgatgataagaacacctat
attcgttatgaacttgactatatcttgtaa
DBGET
integrated database retrieval system
