Dipodomys ordii (Ord's kangaroo rat): 105983710
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Entry
105983710 CDS
T07834
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105983710 (Ddx1)
03016 Transfer RNA biogenesis [BR:
dord03016
]
105983710 (Ddx1)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105983710 (Ddx1)
Spliceosome [BR:
dord03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105983710 (Ddx1)
Transfer RNA biogenesis [BR:
dord03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105983710 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
DUF5766
CMS1
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
105983710
NCBI-ProteinID:
XP_012869145
Ensembl:
ENSDORG00000012847
UniProt:
A0A1S3EZ21
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGQVKFSKNGKDLGLAFEVPAHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSYVVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKNDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgctcaagcagtggaagaaatg
gactggcttcttccaactgatatccaggccgaatctatcccattaatcctaggaggaggt
gatgtgttgatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaagaaggtaaaaaaggaaaaacaaca
attaaaactggagcttcagtgctcaacaaatggcagatgaacccatatgatagagggtct
gcttttgcaattgggtcggatggtctttgttgtcaaagcagagaagtaaaggaatggcat
gggtgcagagctaccaaaggattaatgaaagggaagcactactatgaagtgtcctgtcac
gaccaaggtttgtgcagagttgggtggtctaccatgcaggcctctttagacctaggtact
gacaaatttggatttggatttggtggaacaggaaagaaatcccataataaacagttcgat
aattacggagaggaattcactatgcatgataccattggatgttatctagatatagataaa
ggacaagtcaagttttccaaaaatggaaaagatcttggtctggcatttgaagtaccagca
cacatgaaaaatcaagctctctttcctgcctgtgttttgaagaatgctgaactaaaattt
aactttggggaagaagaatttaagtttccacctaaagatggctttgttgctctttccaag
gcacccgatagttatgttgtcaagtcacagcacacaggtaatgcacaagtgacacaaacc
aagtttcttcccaatgctccaaaagctctcattgttgaaccctcccgggaattagctgaa
caaactttgaataatgttaaacagtttaagaagtatattgataatcctaagttaagggag
cttctgataattggaggtgttgcagcacgggatcaactctctgttttagataatggggtg
gatattgttgtaggtactccaggaagactagatgatttggtgtcaactggaaaactgaac
ttatctcaagtcagattcctggtcctggatgaagctgatgggcttctttctcaaggttat
tctgattttataaataggatgcacagtcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtttgctctgctactttgcattcctttgatgtaaagaagctgtcggag
aagataatgcattttcccacatgggttgatttaaaaggagaagattctgttccggatact
gtgcaccacgttgttgtccctgtgaatcccaaaaatgacaggctctgggaaaggctgggg
aaaaaccacattaggactgatgatgtacatgcaaaagacaacacaagacctggtgctaac
agtccagagatgtggtcggaagctattaaaatcctgaagggggagtatgctgtccgagca
atcaaggaacacaagatggatcaagcaattatcttctgcagaaccaaaatagactgtgat
aacttggagcagtactttatgcaacaaggaggaggacctgataaaaaaggacatcagttc
tcgtgtgtttgtcttcatggtgacagaaagcctcatgagagaaagcaaaacctggagaga
tttaagaagggagatgtaagattcttgatttgcacagatgtagctgccagaggaattgat
atccatggtgttccttatgtcataaatgtcaccctgcctgatgaaaagcaaaactatgta
caccgaatcggcagagtaggaagagctgaaaggatgggtttggctatttccctggtggca
acagaaaaagaaaaggtttggtatcatgtgtgtagcaatcgtggaaaaggatgttacaac
acaagactcaaggaagacgggggctgtactatatggtataatgagatgcagctgctgtct
gagatagaagaacatctgaactgtaccatttctcaagttgagcctgatataaaggttcca
gtggatgagtttgatgggaaagttacctatggtcaaaaaagggctgctggtggtggaaac
tataaaggccatgtggatattttggcacctactgttcaagagttggccgcccttgaaaag
gaggcacagacatctttcctgcatcttggctaccttcccaaccagctgttcagaaccttc
tga
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