Dipodomys ordii (Ord's kangaroo rat): 105983730
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Entry
105983730 CDS
T07834
Symbol
Cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105983730 (Cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105983730 (Cpsf3)
03019 Messenger RNA biogenesis [BR:
dord03019
]
105983730 (Cpsf3)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105983730 (Cpsf3)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105983730 (Cpsf3)
U7-dependent histone pre-mRNA processing factors
105983730 (Cpsf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
DUF1611
Motif
Other DBs
NCBI-GeneID:
105983730
NCBI-ProteinID:
XP_012869187
Ensembl:
ENSDORG00000014263
UniProt:
A0A1S3F0B3
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVVQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSAKDDSFLSVTVDGKTANVNLDTRVWTCSCVSG
LA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcccgcagaagagagcgaccagctgctgatccgaccccttggagctggc
caagaagtaggaagatcatgtattattctggagttcaaaggaagaaaaataatgctggac
tgtgggatccaccctggcctagaaggaatggatgctctcccttatattgacttgattgac
ccagctgagattgatctcctgttaattagtcatttccacttagatcactgtggagcattg
ccctggtttctacagaagacaagtttcaaaggaagaacatttatgacacatgccacgaaa
gctatttatagatggcttctatcagactacgtcaaagttagtaacatatcagcagatgac
atgctgtacactgagacagatttggaagaaagtatggacaaaattgaaaccatcaacttc
cacgaagttaaggaagttgcaggaatcaagttttggtgttaccatgcaggccacgtcctg
ggagccgccatgttcatgattgagatcgcgggtgtgaagcttttatacacaggagatttc
tcaagacaagaagatagacacctaatggccgctgaaattcctaatattaaacccgatata
cttatcattgaatctacgtacgggacccatatccatgagaagcgcgaagagcgagaagca
cggttctgcaacactgtccacgacattgtgaatagagggggccgaggcctcattcctgtc
tttgcactgggaagggctcaggagctgctcttgattctagatgagtactggcagaaccac
cctgagctgcacgacatccccatctattacgcgtcctcattggctaagaagtgcatggct
gtgtaccagacgtatgtgaatgccatgaatgacaagatccgaaagcagatcaacatcaat
aatccctttgttttcaaacatatcagcaacctgaagagcatggaccactttgatgacatc
ggccccagtgtagtcatggcctctccaggcatgatgcagagtggcttgtcccgtgagttg
tttgagagctggtgcaccgataagaggaacggcgtcattattgcagggtactgtgtagaa
ggcacgcttgccaagcatatcatgtctgagcctgaagaaatcactaccatgtctggacag
aagttgccgctgaaaatgtcggttgattacatttctttctctgctcatacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggggaa
cagaacgaaatggccagactgaaagcagcactgattcgagaatatgaagataacgacgag
gttcacatagaggttcacaaccctcggaacacagaggcagtgaccttaaacttcagaggg
gaaaagctggccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcga
gtctcaggaatacttgttaaaagaaactttaactatcacatactttctccttgtgacctg
tccaattatactgacctggccatgagtactgtgaaacagacgcaagccattccgtacacc
gggccctttaatctgctttattaccagctacagaaattgacaggtgatgtagaagagtta
gaaattcaagaaaagcctgctctgaaagtgttcaaaaatattactgtggttcaggagccg
ggcatggtggtcctggagtggctggcaaacccttccaatgacatgtatgcggacaccgtg
acaaccgtgattctggaagttcagtcaaatccgaaaatacggaaaggtgccgtgcagaaa
gtttctaagaagctagagatgcacgtttacagcaagaggctggagatcatgctccaggac
atatttggagaagactgtgtcagtgcaaaggacgactccttcctgagcgtcacagtggac
gggaagacagccaatgttaacttggatacccgggtatggacctgctcctgtgtttcagga
cttgcatag
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