Dipodomys ordii (Ord's kangaroo rat): 105984056
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Entry
105984056 CDS
T07834
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03013
Nucleocytoplasmic transport
dord05014
Amyotrophic lateral sclerosis
dord05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105984056 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
105984056 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
105984056 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105984056 (Nup98)
03036 Chromosome and associated proteins [BR:
dord03036
]
105984056 (Nup98)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105984056 (Nup98)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105984056 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
105984056
NCBI-ProteinID:
XP_012869564
Ensembl:
ENSDORG00000015576
UniProt:
A0A1S3F062
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGSTSGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGSLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGSSSTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYRANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSGFAYGPNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGSLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
SSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGSSIF
GSKPAPGTLGTGIGTGGFGTALGPGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGF
GAPQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTTGTSKSHLFDGLDDDEPSLANGAFMPKKSIKK
LVLKNLNNSNLFSPVNRDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSHFY
TNPIAKPIPQTPENVGNKHNSNSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDRE
EIENNSYHMHPAGIVLTKIGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDTEKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTS
SKKLKTAPLPPAGQTTPFQMALNGKPASPPQTQSPEVEQLGRVVELDSDMIDITQEPVLD
SVLEEGMPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDSMDQRFGHLPAKGD
IAQEVCSPRLPISASHSSKSRSIVGGLLQSKFASGVFLSPSASVQECRIPRASSMMNISS
PSPWSVPPPLTTVFTVPSPSPEVQLKTVGTRRQLGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLNSSHELESHQATDSMEYGFLPNPVAVKSLTESPFKVHLEKL
SLRQRRLDEDLQLYQTPLELKLKRSTVHVDELCPLIVPNAGVEVIHDYANWVKEASRDVL
EAQIVKPWSLTWTLCEALWGHLKELDNQLDEPIEYIQILERRRAFSRWLSHTAAPQIEEE
VSLTRKDNPIEAVFSYLTGNRISEACSLAQHSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTAS
ISRALSMYEEAFQNTSEGDRYACSPLPSYLEGSGCLIEEEQDSQRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVLLHIENSSMREKAVRELLTRHCQLVETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESDKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDFLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIQVIEMLHHIQQVDCSGYELEKLHTKVTSLCNRIEQIQCHNAKDR
LAQSDMAKRIANLLRVVLSLQHVPDATSESTPDPQRVPLRLLAPHIGRLPMPEDYALDEL
RSLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaaccccctttgggggtagtacaagtggctttggtacaaca
tcaacatttggacaaaacactggctttggcaccactagcggaggggcatttggaacatct
gcatttggttctagcaacaatactggaagcttatttggaaattcacagaccaaaccagga
ggattatttggtaccagttcatttagccagccagctacctccacaagcactggttttggg
tttggtacatcaacaggaacatcaaatagcttgtttggatcttcaagtacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttgggaatttt
ggaacaagtacaagcagtgggggactcttcggaacaacaaataccacctctaatcctttt
ggtagtacctcaggctccctttttgggccaagtagttttacagcagcacctactgggact
accattaaatttaatcctccaactggtacagatactatggttaaagctggagttagcacc
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcgggctaaccggaaaggtccgcagaatcaggtggga
gcagggaccacagctggcttatttggatcttcaccagccacctccagtgcaaccggactc
ttcagctcctccaccactaattcaggctttgcatatggtccgaacaaaactgcctttgga
actagtacaactggatttggaacaaatccaggtggtctctttggccagcagaatcaacag
actaccagcctcttcagcaaaccatttggccaggccacaactacccagaacactggcttt
tcctttggtaacaccagcacccttggacagccaagtactaataccatgggtttatttgga
gtaacccaagcctcacagcctggaagtctttttgggacagctacaaacaccagcactggg
actgcttttggaacaggaacaggtctctttgggcagaccaatactgggtttggtgcagtt
agttcgaccctgtttggcaataacaagcttactacatttggaaccagtacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcacaaataccagtgggagtagtattttt
ggcagtaaaccagcacctgggactctgggaactggtattggtacaggaggatttggaaca
gctcttggtcctggacaggcatctttgtttgggaacaaccaacctaagattggagggcct
cttggtacaggagcctttggagcccctggatttaatactacaacagccactttgggcttt
ggtgccccccaggctccagtagctttgacagatccaaatgcttctgctgctcagcaggct
gttctccagcagcatctcaatagtctaacatattcaccttttggagactctcctctcttc
cggaatcccatgtcagaccccaagaagaaagaagagagattaaagccaacaaatccagca
gcccagaaggctcttactacacctactcattataaactgacacctcgacctgctaccaga
gtacgaccaaaggctctgcaaacaacaggcacatccaaatcccatctgtttgatgggctt
gatgatgatgaaccatcccttgcgaatggagcattcatgcccaagaagagcattaagaaa
ttagttttgaagaaccttaacaacagcaatctcttttctcctgttaatcgtgattcagaa
gatctagcttcaccatctgaatatccggaaaatggagagagatttagtttcctgagcaaa
cctgttgatgaaaaccatcagcaggatggagatgaagattctcttgtatcccatttttac
actaatcctattgccaaaccaattcctcaaactccagagaatgttggcaataaacacaac
agcaacagtgtggatgataccattgttgcactgaacatgcgtgttgctttgcgaaatggc
ctagaaggaagtagtgaagaaacttccttccatgatgagtcactgcaagatgaccgagag
gaaatagaaaataattcttaccatatgcatccagcaggcattgttctcactaagattggt
tactatactattccatctatggatgaccttgctaaaattaccaatgaaaaaggagaatgc
atcgtctctgacttcactattggtcgtaaaggttatggctcaatctatttcgaaggagat
gtgaatttaacaaatctaaatttggatgacattgtgcatatccggaggaaagaagttatt
gtctacttagatgataccgaaaaaccacccgtgggtgaagggctgaatagaaaggctgaa
gttacattggatggagtttggccaactgataaaacatcacgttgtttaataaagagtcca
gatagacttgctgacatcaactatgagggaagattggaagcagtttcaaggaaacaggga
gcccaattcaaggagtaccggcctgaaactggttcttgggtgtttaaggtctcccatttt
tccaaatatggccttcaggattctgatgaagaggaggaagaacacccatccaaaactagt
tcaaagaagttgaagactgcccctttgcctcctgcaggccagactacccctttccagatg
gctcttaatggcaaacctgcatctccacctcagactcagagcccagaggtggaacagtta
gggagggttgtggagctggacagtgacatgatagatattacccaggagccagttttggat
tccgtgttagaagaaggcatgcctgaggatcaagaacctgtgtctgcttcaacacatatt
gcatcttcactgggaattaatccgcatgtcttacagattatgaaagcatcattgcttgct
gatgaagaagatgtagactccatggatcaacgctttggtcatcttcctgccaaaggagat
attgctcaagaagtctgttctccccgactccccatttcagcatcccattcatcaaaatcc
cgttcaatagttggtgggttactacaatcaaaatttgcaagtggcgtttttctttcacca
agtgcctctgtgcaagaatgtcgaattcccagagcatcatctatgatgaatatctcatcc
ccttctccttggtctgtccctccacccctgaccacagtgtttacagtgcccagtccaagt
cctgaggttcagctcaagacagtgggaacacgcagacaactaggcctagtccctcttgaa
aagtctgtcacatatggcaagggaaaactcttgatggacatggccctattcatgggacgc
tcatttcgagttggttggggccctaactggactcttgctaatagtggagaacagctgaat
agctctcatgaactggaaagtcatcaggctaccgattctatggaatatggattcttgccc
aatcccgtagctgttaaatccctgacggaatccccattcaaagttcatttagaaaaactc
agtctaagacaaaggagactggatgaagatctgcaattatatcagacacctctggagctc
aaattaaaacgtagcacggtccatgtggatgaactgtgtcctctcattgtccccaatgcg
ggagttgaggtcattcatgattatgctaactgggttaaggaagcatccagagatgtattg
gaagcacaaattgtgaagccctggagcctcacatggacattatgtgaagccctatggggt
cacctgaaggaacttgacaaccagctagatgagcccattgaatacattcagattctggaa
cgaagaagagctttttctcgctggctatcccatactgctgcacctcagattgaagaagaa
gtttccttaacccgaaaagacaaccctatagaggctgtcttcagctacctcacaggcaac
aggatcagtgaggcctgctctcttgcacagcattcaggggatcatcgccttgcccttctt
ttatctcagttggtgggtagccagtcagtccgggagctactcaccatgcagctggctgat
tggcatcagctccaggctgactgtttcatccaggatgagagattgcgcatctttgccctc
ttggctggaaaaccggtatggcagctctcagagcagaagcaaatcaatgtgtgctctcag
ctggattggaaacgttcccttgctgtacatctttggtatttgcttccaccaacagcctct
atttccagagcactcagcatgtatgaagaagcatttcagaatacttctgagggtgacagg
tatgcctgttccccgcttccttcatacctagagggttctggctgtttgatagaggaggag
caagactcgcagagaccacttcaagatgtttgttttcaccttctaaaactctacagtgac
agacattatgatctcaatcagctgttggagcctcgaagcataactgcagatcctttggac
tatcgcctaagctggcacttgtgggaagtgctgcgagctcttaattatacccatctctca
gagcagtgtgagggtgtgctgcaggccagttatgctggccaactggaaagtgagggtctc
tgggagtgggccatctttgttctcctgcacattgaaaactcaagcatgcgcgagaaggct
gttcgagagctgcttacccggcactgccagctggtggagacccctgaatcttgggctaag
gagacattccttacccagaaactttgtgtacctgctgagtggattcatgaggccaaagct
gtgcgagcccacatggaatctgataagcatttagaggctctctatttgtttaaagctggt
cactggaaccgctgccacaaacttgtcatccgacacttagcttctgatgccatcattaat
gagaactatgactttctgaagggttttttggaagacctggcacctccagaacgcagtagc
ctaattcaggactgggaaacatctgggcttgtttacctggactatattcaagtcattgaa
atgctccatcatattcagcaggtggattgctcaggttatgaactagagaagttacatacc
aaagtgacgtcactgtgcaaccgcatagaacagatccaatgtcacaatgccaaggatcgt
ctagctcaatcagacatggccaagcgtatagccaatttgctgcgggtggtactgagcctt
cagcatgtccctgatgcaacttcagaatcaacaccagaccctcagcgagtccctttacgc
ctacttgctccacacattggccggctgcccatgcctgaggactatgccttggacgaactg
cgcagtctcacacagtcctatctgcgagaactgactgttgggagccagtga
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integrated database retrieval system
