Dipodomys ordii (Ord's kangaroo rat): 105984097
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Entry
105984097 CDS
T07834
Symbol
Trim21
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21
KO
K10651
tripartite motif-containing protein 21 [EC:
2.3.2.27
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
105984097 (Trim21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105984097 (Trim21)
04131 Membrane trafficking [BR:
dord04131
]
105984097 (Trim21)
04121 Ubiquitin system [BR:
dord04121
]
105984097 (Trim21)
Enzymes [BR:
dord01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105984097 (Trim21)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105984097 (Trim21)
Membrane trafficking [BR:
dord04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
105984097 (Trim21)
Ubiquitin system [BR:
dord04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105984097 (Trim21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_4
RING_XB3-XBAT31
zf-RING_10
zf-Nse
Sina_RING
zf-rbx1
U-box
PanZ
Motif
Other DBs
NCBI-GeneID:
105984097
NCBI-ProteinID:
XP_012869627
Ensembl:
ENSDORG00000007305
UniProt:
A0A1S3F1I4
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MDTEMPLAKMWEEVTCSICLDPMVEPVSIDCGHSFCQECISQVGKDGGSVCPVCRKHFLC
KNFRPNRHLANMVDNLKQIGQDDTKKGTQERQCVTHGEKLHLFCEEDEQALCWVCVQSRK
HRDHTMVPMEEAAQVYQEKLQTALVKLRQEQMLTEKMEADLAMKREDWKRKVETHKLRIH
AEFAQQKSFLVEEEQRQLQKLEKERREELRLLGETEVELAQQNQELQKLISELEWRSRSS
ALEMLQEVRTVLERIESWNLKKLDIVSPDIRSVCHVPGLKKMLRAYGVYITLDQDTANPW
LELSKDRRQVKLGNIQQKVPESEERFDNYPMVLGTQIITSGKLYWEVDVTGKESWDLGVC
RNSVQRKGHFLLSPENGFWTIWLWKKDKYEAGTCPQSSLHLQVLPCQVGIFLDYEAGIVS
FYNITDHGSLIYTFPECNFDGPLRPFFSPGFNDGGGNAAPLTLCPLKMGRPESADD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaaatgcccctggcaaagatgtgggaggaggtcacctgttctatctgcctg
gatcccatggtagagcccgtgagtatcgactgtggccacagcttttgccaggaatgcatc
tctcaggtcgggaaagatggaggcagtgtgtgtccggtgtgccggaaacactttctgtgc
aagaacttccggcccaaccgacacctagccaacatggtggacaaccttaaacaaataggc
caggatgataccaagaagggcacacaagagagacaatgtgtgactcatggagaaaaactt
cacctgttttgtgaggaagatgaacaggccctttgctgggtgtgcgtccaatcccggaaa
caccgagatcacaccatggtccctatggaggaggctgctcaggtataccaggagaaactc
caaacagccttagtaaaactgagacaagagcagatgttgactgagaagatggaagcggat
cttgcaatgaagagagaagactggaagaggaaggttgagacacacaaactgaggattcac
gccgagtttgcacaacagaaaagcttcctggttgaagaggaacagaggcaactgcagaag
ctggagaaggaaaggagagaagagctgagactccttggggagacagaggtggagctagcg
cagcagaaccaggaactacaaaagctaatctcagagctggagtggaggagtcggagttca
gcattggagatgttgcaggaggtgagaactgtcctggaaaggattgagtcctggaacctg
aagaagctggacattgtctccccagacataagaagtgtgtgccatgtgccagggctaaag
aagatgctgagggcatatggagtatacatcactctggatcaagacacagccaatccatgg
ctcgagctttctaaggatcggagacaagtgaagcttggaaacatccaacaaaaggtgccc
gagagtgaagagagatttgataattaccccatggtcctgggtacccagatcattacctct
ggaaaactctactgggaggtagatgtgacaggaaaagagtcctgggacctgggggtttgt
aggaactctgtgcagaggaagggacattttttgctcagccctgagaatggcttctggaca
atttggttgtggaaaaaggacaagtatgaggctggcacctgccctcagtcctctctacac
cttcaggtgctgccatgccaagtcggcattttcctggactatgaggctggtattgtctcc
ttctacaatatcactgaccacggctccctcatctacaccttccctgaatgtaattttgat
gggcctctgcggcccttcttcagccctggtttcaatgatggaggaggaaacgcagcccct
ctaaccctttgtccactcaaaatgggaagaccagaatctgctgatgactga
DBGET
integrated database retrieval system
