Dipodomys ordii (Ord's kangaroo rat): 105984123
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Entry
105984123 CDS
T07834
Symbol
Atg16l2
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04140
Autophagy - animal
dord04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
105984123 (Atg16l2)
04140 Autophagy - animal
105984123 (Atg16l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105984123 (Atg16l2)
03029 Mitochondrial biogenesis [BR:
dord03029
]
105984123 (Atg16l2)
Membrane trafficking [BR:
dord04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105984123 (Atg16l2)
Others
Specific organelles associated proteins
Auto phagosome
105984123 (Atg16l2)
Mitochondrial biogenesis [BR:
dord03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105984123 (Atg16l2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
DSE1_N
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
ASA1
WD40_RFWD3
DUF5693
Motif
Other DBs
NCBI-GeneID:
105984123
NCBI-ProteinID:
XP_012869666
Ensembl:
ENSDORG00000011918
UniProt:
A0A1S3EZ18
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MAGRSDPSAPAALWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKAELLANFSEKLQPQ
PNDVTPSTHQGSWEVGGEEESSPDSDQVSSLAALRLKWQEEEEGLQLVCGEMAYQVVQKS
AALGTMQSELEERQGRLAALEARVELLQEARAQHALKVEDQRAQNAALRSAYEALRAHSE
QQEAALRRLQEEARDLLERLVQRKARAAAERNLRNERRERAHQARVSQELKKAAKRTVSI
SKSPDTSRDGIRQETETQAVEPESLEREACEKWKRPFRSASATSLTLSRCVDVVKGLLDF
KKRRGHSVGGAPEQLYQSIPVCVAARLPTQVQDVLDAHLSEINAVQFGPNSSLLATGGDD
RLIHLWNVVGGRLEAKQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGEAQSKET
LSGHKDKVTAAKFKLTKHQAVTGSRDRTVKEWDLGRAYCSRTINVISYCNDVVCGDHIII
SGHNDQKIRFWDSRLPSCTQVIPVQGRVTSLSLSHDQMHLLSCSRDDTLKVIDLRVSNIR
QVFRADGFKCGSDWTKAVFSPDRSYALAGSWDGALYIWNVDTGKLESSLRGPHCAAVNAV
AWCYSGSHVVSVDQARKIVLWR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcgcagcgaccccagcgcccctgcagctctctggaaacgccacatcgtgcgg
cagctgcggcatcgggaccgcacgcaaaaggcactcttcctggagctggtgccggcctat
aatcatctcctagagaaagccgagctattagccaacttctcagagaagctgcagccacaa
ccaaatgacgtcacccctagtacccatcagggctcctgggaggttggcggggaggaggag
tcaagccctgactcagaccaagtctcatcactagccgctctgaggctgaagtggcaggag
gaagaagagggtctccagctggtctgtggtgagatggcctaccaggtggtgcagaagagt
gcagcgctaggcaccatgcagtcagagctggaggagcggcagggcaggctggcggctctg
gaggcccgcgtggagctgctgcaggaggctcgggcgcaacacgccctgaaggtggaggat
caacgtgcccagaacgcagcgctgcgatcggcctacgaggccctgcgtgcgcactcggag
caacaggaggcggcactgcgcaggctccaggaggaggcgcgcgacctactggagaggctt
gtgcagcgcaaggcgcgtgcggcagctgagcgcaacctgcgcaacgaacgccgggagcga
gcccaccaggcacgggtgtcccaggagctgaagaaggctgccaagaggactgtgagcatc
agcaagagcccagacacctctagagatggaatcagacaggagactgagactcaggcagtt
gagcctgagtccctggagagggaggcttgtgaaaaatggaagaggcccttcaggtctgcc
tcggccacctccctgacactgtcccgctgtgtggatgtggtgaaggggctgctggacttc
aagaagaggagaggtcactcagttggaggggcccctgagcagctataccaaagcatacct
gtgtgtgtagctgcccgacttcctacccaggttcaggatgtcctggatgcccacctctct
gagatcaatgctgttcagtttggccccaacagcagcctcctggccactggcggggatgac
cgtcttatccacctctggaatgttgtgggaggtcgcctagaggccaaacagacacttgaa
ggagctggtggcagcatcaccagtgtggactttgacccctcaggctcccaggttttggca
gctacttacaaccaggcggctcagctctggaaggtgggagaggcacagtccaaggagaca
ctatctggacacaaggacaaggtgacagctgcaaaattcaagctcacgaagcaccaggcg
gtgactgggagccgagaccgaacagtgaaggagtgggacctcggccgtgcctactgttca
agaacaatcaatgtcatttcctattgtaatgacgtggtatgcggggaccacatcatcatt
agtggtcacaatgaccagaagatccggttctgggacagcaggttacccagctgtacccag
gtcatccctgtgcagggccgggttacttccctgagcctcagccatgaccaaatgcacctg
cttagctgttcccgagacgatacactcaaggtgatcgacctgcgtgttagcaatatccga
caggtgttcagagctgatggcttcaaatgcggttctgactggaccaaagccgtgttcagc
cctgacagaagctatgcactggcaggctcctgggacggcgccctctacatctggaatgtt
gacacagggaaactggagagcagccttcgggggccccactgtgctgctgtgaatgctgtg
gcctggtgctactctgggagccacgttgtgagcgtggaccaggccaggaagattgtgctc
tggcgctag
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integrated database retrieval system
