Dipodomys ordii (Ord's kangaroo rat): 105984585
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Entry
105984585 CDS
T07834
Symbol
Taf4b
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03022
Basal transcription factors
dord05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105984585 (Taf4b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
105984585 (Taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105984585 (Taf4b)
03036 Chromosome and associated proteins [BR:
dord03036
]
105984585 (Taf4b)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105984585 (Taf4b)
Coactivators
SAGA/TFTC/STAGA complex
105984585 (Taf4b)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105984585 (Taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
105984585
NCBI-ProteinID:
XP_012870265
UniProt:
A0A1S3F212
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MTLSLMNDIFQISYFLLKEAAQERVARALFRTALRGIPGTGASRSAVNPRPLQPPEHFLA
VGKGGVRSEVPEVGSEVTPFGELRVRVRRSRDRRQRRTASGAVTVAPAALGAVAKAPLSV
RAEPLASQPSRASVGTLVTKVAPVSALPKLSLGGPALSAAPQLVTVKAPSTTTIQLPANV
QLPPGTVLIKSNNGQLMLVSPQQAVTRTETTNNITSRPTAPVNTQTVKICTMPNSSSQLI
KNVAVAPIKKVAQIGTTVTTTVLNSSSVQSVAVPTNVVTVNPANLVNAITTRKPSSLGVS
STPSNEPSLKAENSTTTQITLSPAMLDNVKKCKNFLAMLIKLACSGSHSPDMGQNVKKLV
EELLDAKIEAEEFTRKLYVELKSSPQPHLVPFLKKSVVPLRQLLPNSRSFIEQCIQQTSG
EVVIPTCTTAATTSPVVTTTVSSVQSEQPIVVSGATVPGTVSVQTLNPLAGPGGTKAGVV
TVRSVGPAAVTVGSTAGTVLLQTSKPLVTPIPNTVTSVSLQPEKPVVSGAAVTLALPSVT
FGETSAAAFCLPSVKPVATSAGTTPDKPVIGAPVQIKLAPPGPLLSQPTGISQAVKVKQL
YXLISWFXVVQQPSGSLANKQVTKISHPTALTIQKPGQKKMPVNTIMPTTSILKQITLPG
NKILSLQASTSPKNKVRENGTVCFRDEDDINDVPSMAGVNLSEENACILATNSEVVGTLI
QSCKDEPFLFIGALEKRILDIGKKHDITEFNSDAVNLISHATQERLRGLLEKLTTIAQHR
MTTYKASENYILSSDTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRL
KQKAKELQQLELAQIQHRDANLTALAAIGPRKKRPLESGSESLKDGLASGTSSLTATKLL
LRPRITRICLRDLIFCMEQEREMKYSRALYLALLK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgacactgtccttaatgaatgacatcttccaaatcagttactttctcttaaaagaagca
gcccaagaaagggtagctcgggctcttttcaggaccgccctaagggggatccccgggaca
ggggcgtctcgcagcgcagtgaatccccgccctcttcagcccccagagcactttctggcg
gtggggaaaggaggcgttcggagtgaggttccggaggtggggagtgaagtgacgcccttc
ggcgagctgcgcgtccgggtccgccgcagtcgggaccgcaggcagaggcgcaccgcctcg
ggcgccgtgaccgtggccccggcggccttgggcgccgtggccaaggctcccctgagtgtc
cgcgcggagcccttggcgtcccagccctcgcgcgcttccgtggggaccttggtgaccaaa
gtggctcctgtcagcgccctcccgaaactcagcctcggtggccccgcgctgtcggcggct
ccgcagctggtcaccgtgaaagcccccagcaccacgaccatccagttgcccgccaacgtg
cagctccctccaggtacagttttgatcaaaagtaacaatggtcagttgatgttggtatca
cctcagcaagctgtaacaagaactgaaaccacaaacaacataacttcaaggccaacagca
ccagtaaatactcaaacagtcaaaatctgtacaatgccgaattctagttcacaattaatc
aagaatgtggcagtggcacctatcaaaaaagtggcacagataggaactactgtgacaact
actgttctgaactcttcctcagtacaatctgtcgctgtgcctaccaatgttgtcacagtt
aatcctgcaaatctggtaaatgctataaccacccggaagccatcaagtttgggagtatca
tctaccccttcaaatgagcccagtctcaaagcagagaactcaacaactactcagattact
ctttctccagcaatgctagacaatgtgaagaaatgtaaaaacttccttgcaatgttaata
aaactagcatgtagtggatctcactctccagatatggggcagaatgtgaagaagctagtg
gaagaacttttggatgcaaaaattgaagccgaagaatttactaggaaactatatgttgaa
ctcaagtcttcacctcagcctcaccttgttccttttcttaagaaaagtgtagttccctta
cgacagcttctgcctaactcccggagctttattgaacagtgtattcagcagacttctggt
gaggttgtcattcctacctgtactacagcagcaacaacttctcctgtggtgacaactaca
gtatcctcagtccaatccgaacagcccattgttgtttctggagcaacagtacctggaact
gtgtctgtgcaaactctgaatccacttgctggtccaggaggaacaaaagctggggtggtg
acagtccgttctgtaggtccagctgctgtcacggtaggatcaacagctggaactgttttg
cttcaaacttcaaaaccacttgtgacacccataccaaatacagtaacatcagtctctctt
caacctgagaagccagttgtctcaggtgcagcagtaacattggctctcccatctgtgact
tttggagaaacttcagctgcagctttttgtcttccatctgtgaaacctgttgctacttct
gctgggaccacacctgataagcctgtcattggtgccccagttcaaatcaaacttgcccct
ccaggacctctcctttcacaacccactggtatttcacaggcagttaaagtcaagcaacta
tactgattgatttcatggttttaggtagtccagcagccttccggaagccttgctaataaa
caagtgaccaaaatttcccatcccacagcattgaccattcagaaaccaggacagaagaag
atgccggtaaacaccataatgcctactacttccattttaaagcaaattacgctgcctgga
aataaaattctttcgcttcaagcatctactagtccaaaaaacaaagtaagagaaaatggg
accgtatgcttcagagatgaagatgacatcaatgatgtaccttccatggcaggagtcaac
ctcagtgaagaaaatgcctgtatcttagcaacaaactctgaagtggttggtacactcatt
cagtcatgtaaagatgaaccatttcttttcattggagctcttgaaaagagaattttagac
attggtaaaaagcatgacattacagaatttaattctgatgctgtgaatttgatctcccat
gcaacacaggagagattacgaggccttctagaaaaattgactacaattgctcagcatcga
atgactacttataaggcaagtgaaaattacatcctgtctagtgataccaggtcacagctc
aaatttcttgaaaagctggatcaattggagaagcagagaaaggatttggaagaaagagaa
atgttacttaaggcagccaagagtcgttccaataaagaagatccagaacagctgagatta
aagcagaaagccaaagagttacagcaattggagcttgcccagatacagcacagagatgct
aatcttacagcccttgcagctattggaccacggaagaaaagaccattagaatctggaagt
gagagcttgaaagatggccttgcttctgggacatccagcctgacagccaccaaactgttg
cttcgtccaagaatcacaagaatctgcctcagggacttgatattctgtatggaacaagaa
agggagatgaagtattctcgagccctgtaccttgcccttctgaagtga
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