Dipodomys ordii (Ord's kangaroo rat): 105984997
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Entry
105984997 CDS
T07834
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105984997 (Taf1a)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
105984997 (Taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
105984997
NCBI-ProteinID:
XP_012870855
Ensembl:
ENSDORG00000016042
UniProt:
A0A1S3F3R9
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MSDCSEELTRPATEDDDEMETSVVSSAGMHFPWLQNKLETVVTGGKKKKDFAQTTSACLS
FIQEALLKHQWQRAAEFMHSYLQILEDLDSHKRQAAPEIIWKLGSEILFYHPKSNVETFN
TFADRMKNIGVLNYLKISLQHALYLLHHGMLEDANRNLSQAETWRYGEKSASQEIIMNLV
QAYKGLLQYYTWSKKKMELSKLDKNDYAYSTKSRNILNQSWKTSTHIGALIKIPGVWDPF
VKSYVEMLEFYGDHDGARKVLTNYAYDAKFPSNPNAHIYLYNFLKREKAPKAKLLSVLKI
LYEIVPSHQLMLEFHVLLRKSEKEEHRKLGLEVLFGLLDFAGCTKNITAWKYLAKYLKQI
LIQNHPTWVQEQWNSRKTWWPTFHFSYFWAKCDWKEDTDLACEKAFVAGILLGKGCRYFR
YILKQDHQVLRKKIKQMKKSVKKYSIVNLSI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattgcagtgaagaattgacaaggcctgcaacagaagatgatgacgagatggaa
acttcagttgtctctagtgcaggaatgcattttccttggcttcaaaacaaattagaaact
gtagtgactggagggaaaaagaagaaggattttgctcagacaacaagtgcttgtttaagt
tttatccaagaagctctgctgaagcaccagtggcagcgagctgcagagttcatgcacagt
tatttgcagatcttggaagatttagacagccacaaaagacaggctgcacctgagattatt
tggaagcttggaagtgaaattctattttatcatcccaaaagcaatgtggagactttcaat
acctttgctgaccggatgaaaaacattggtgtcttgaattatctaaagatctccttacaa
catgcattgtaccttctacatcatggaatgcttgaagatgcaaacagaaatctaagtcag
gcagaaacatggagatacggtgaaaagtcagcttcccaggaaataataatgaaccttgtt
caggcctacaaagggcttttgcaatactatacttggtctaaaaagaagatggaattgtca
aagcttgataagaatgattatgcttacagcacaaaatcccgaaatatacttaaccagagc
tggaagacatctacacatattggtgcattgattaaaattccaggagtttgggaccctttt
gtgaagagttatgtagagatgctggaattctatggtgatcatgatggagccagaaaggtt
ctcaccaattatgcctatgatgcaaagtttccatcaaatcccaatgctcacatctactta
tacaactttctaaagcgagagaaggcaccaaaagcaaaacttctaagcgtgcttaagatt
ttatatgagattgttccatctcatcagctgatgttagaattccatgtattacttagaaaa
tcagaaaaagaagaacaccgtaaactgggtttggaagtgttatttgggcttttggatttt
gctggatgcacaaagaacataactgcttggaaatatttggcaaaatatctgaaacaaata
ttaatacaaaatcatcctacatgggttcaagaacaatggaactccaggaaaacctggtgg
ccaacctttcacttcagctacttttgggcaaaatgtgattggaaagaagacacagatttg
gcttgtgagaaagcttttgtggctgggatattgttaggaaaaggttgtagatattttcgg
tatattttaaaacaagatcatcaagtgttaaggaagaaaattaagcaaatgaagaaatcg
gtgaaaaaatacagtattgtgaatctgagcatctga
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