Dipodomys ordii (Ord's kangaroo rat): 105985049
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Entry
105985049 CDS
T07834
Symbol
Psmc1
Name
(RefSeq) 26S protease regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03050
Proteasome
dord05010
Alzheimer disease
dord05012
Parkinson disease
dord05014
Amyotrophic lateral sclerosis
dord05016
Huntington disease
dord05017
Spinocerebellar ataxia
dord05020
Prion disease
dord05022
Pathways of neurodegeneration - multiple diseases
dord05165
Human papillomavirus infection
dord05169
Epstein-Barr virus infection
dord05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
105985049 (Psmc1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
105985049 (Psmc1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
105985049 (Psmc1)
05165 Human papillomavirus infection
105985049 (Psmc1)
09164 Neurodegenerative disease
05010 Alzheimer disease
105985049 (Psmc1)
05012 Parkinson disease
105985049 (Psmc1)
05014 Amyotrophic lateral sclerosis
105985049 (Psmc1)
05016 Huntington disease
105985049 (Psmc1)
05017 Spinocerebellar ataxia
105985049 (Psmc1)
05020 Prion disease
105985049 (Psmc1)
05022 Pathways of neurodegeneration - multiple diseases
105985049 (Psmc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dord03051
]
105985049 (Psmc1)
Proteasome [BR:
dord03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
105985049 (Psmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_22
AAA_2
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_3
AAA_14
ATPase
RNA_helicase
IstB_IS21
TIP49
NPHP3_N
Mg_chelatase
AAA_11
AAA_33
AAA_7
NACHT
Parvo_NS1
PhoH
ABC_tran
AAA_24
Prot_ATP_ID_OB_N
NB-ARC
AAA_18
AAA_30
TsaE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
105985049
NCBI-ProteinID:
XP_012870919
Ensembl:
ENSDORG00000003196
UniProt:
A0A1S3F495
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYV
SILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQ
IQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS
ELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELL
NQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT
LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG
TPEGLYL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaatttattagaaatcaggaacaaatgaaaccattagaagaaaagcaagag
gaggaaagatccaaggtggatgacctgagggggaccccgatgtcagtaggcaccttggag
gagatcatcgatgacaatcatgccatcgtgtctacatctgtgggctctgagcactacgtc
agcatcctttcattcgtggacaaagatctgctggaaccaggctgctcagtcctgctcaac
cacaaggtgcacgcagtgataggggtgctgatggatgacacagaccccctggtcacagtg
atgaaggtggaaaaggctccccaggagacatatgcagatattgggggcttagacaaccaa
atccaggaaattaaggaatctgtggagttgcctctcacccatcctgaatattatgaagag
atgggtataaaaccccctaagggagtcattctctatggtccacctggcacaggtaaaact
ctgttagctaaagcagtagcaaatcaaacctcagccactttcttgagagtggtgggctca
gaacttattcagaagtacctaggcgatgggcccaaacttgtacgggaattgtttcgagtt
gcagaagaacacgcaccatccatcgtgtttattgatgaaatcgatgccattgggaccaaa
aggtacgattcaaattctggaggtgagagagaaattcagcgaaccatgctggagttgttg
aaccagctggatggctttgattcaaggggggatgtgaaagttatcatggccactaaccgg
atagaaactttggatccagcactgatcagaccaggccgcattgacagaaagattgagttc
cccctgcctgatgagaagacaaagaagcgtatcttccagattcacacaagcaggatgacg
ctggctgatgacgtgactctagatgacttgatcatggcaaaggatgacctctctggggct
gacatcaaggcaatttgtacagaagctggtctgatggccttgagagaacgcagaatgaaa
gtaacaaatgaagacttcaaaaaatctaaagaaaacgttctttataagaaacaagaaggc
acgcctgaggggctctatctctag
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integrated database retrieval system
