Dipodomys ordii (Ord's kangaroo rat): 105985239 Help Entry 105985239         CDS       T07834                                  Symbol Hif1a Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord04066   HIF-1 signaling pathway dord04137   Mitophagy - animal dord04140   Autophagy - animal dord04148   Efferocytosis dord04659   Th17 cell differentiation dord04919   Thyroid hormone signaling pathway dord05167   Kaposi sarcoma-associated herpesvirus infection dord05200   Pathways in cancer dord05205   Proteoglycans in cancer dord05208   Chemical carcinogenesis - reactive oxygen species dord05211   Renal cell carcinoma dord05230   Central carbon metabolism in cancer dord05231   Choline metabolism in cancer dord05235   PD-L1 expression and PD-1 checkpoint pathway in cancer Brite KEGG Orthology (KO) [BR:dord00001]  09130 Environmental Information Processing   09132 Signal transduction    04066 HIF-1 signaling pathway     105985239 (Hif1a)  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     105985239 (Hif1a)    04137 Mitophagy - animal     105985239 (Hif1a)    04148 Efferocytosis     105985239 (Hif1a)  09150 Organismal Systems   09151 Immune system    04659 Th17 cell differentiation     105985239 (Hif1a)   09152 Endocrine system    04919 Thyroid hormone signaling pathway     105985239 (Hif1a)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     105985239 (Hif1a)    05205 Proteoglycans in cancer     105985239 (Hif1a)    05208 Chemical carcinogenesis - reactive oxygen species     105985239 (Hif1a)    05230 Central carbon metabolism in cancer     105985239 (Hif1a)    05231 Choline metabolism in cancer     105985239 (Hif1a)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     105985239 (Hif1a)   09162 Cancer: specific types    05211 Renal cell carcinoma     105985239 (Hif1a)   09172 Infectious disease: viral    05167 Kaposi sarcoma-associated herpesvirus infection     105985239 (Hif1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:dord03000]     105985239 (Hif1a) Transcription factors [BR:dord03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     105985239 (Hif1a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 bHLH_HIF1A Motif Other DBs NCBI-GeneID:  105985239 NCBI-ProteinID:  XP_012871136 UniProt:  A0A1S3F3C1 LinkDB All DBs Position Unknown AA seq 762 aa AA seqDB search MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC VLKPVESSDMKMTQLFIKVEPEDTGSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTE TEDQQLEEVPLYNDVMFPSSNEKLSTINLAMSPLPASESPKALRSNADPALNEEVALKLE PNTESLELSFTMPQIQDQPASPTDGSSRQSSPEPNSPSEYCFDVDSVFKLELVEKLFAED TEAKNPFSSQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLENNSSMNTVTVFQPTPLQEP AINTTTATATATATDELKTVTKDGMEDVKILLVSPSPTHVPKETTSDTTSSSSSYSGTQS RTVSPNIAGNGVIEQTEKSHPRSPNVVSVILSQRNTVPEEELNPKIIALQNAQRKRKMEH DGSLFQAVGIGTLLQQADDQTTTTSLSWKRVKGCKSSEPNGVEQKTIILIPSDLACRLLG QSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEDLLRALDQVN NT seq 2289 nt NT seq  +upstreamnt  +downstreamnt atgaggcttaccatcagctacttgcgtgtgagaaaacttcttgatgctggtgatctggac attgaagatgagatgaaggcccagatgaactgcttttatctgaaagccctggatggcttt gttatggtgctaacagatgatggcgacatgatttacatttctgataatgtaaacaaatac atggggttgactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt gaccatgaggaaatgagagaaatgctcacacacagaaatggccctgtgaaaaagggtaaa gaacaaaatacacaacgaagcttttttctcagaatgaagtgtaccctaactagccgaggg agaactatgaacataaagtctgcaacgtggaaggtacttcactgcacaggccacattcat gtgtatgataccaacagtaaccagcctcagtgtggatataagaaaccgcccatgacctgc ttggtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagatagt aagacttttcttagtcgacacagcctggatatgaagttttcttattgtgatgaaagaatt actgaattgatgggatatgagccagaagaacttttgggtcgctcaatttatgagtattat catgcattggactctgatcatctgaccaaaactcaccatgatatgtttactaaaggacaa gtcaccacaggacagtacaggatgcttgccaaaagaggtggctatgtctgggttgaaact caagcaactgttatctataataccaagaactctcaaccacaatgtattgtgtgtgtgaat tatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcatcaaagttgag ccagaggatacaggcagcctctttgataaacttaaaaaggagccggatgctttaactctg ctggccccagctgctggagacacaatcatatctctagattttggaagcaatgacacagaa actgaagaccaacaacttgaggaagttccattatacaatgatgtaatgttcccctcatct aatgaaaaactgtcaactataaacttggcgatgtctccattacctgcctctgaaagtcca aaggcacttcgaagtaatgctgaccctgcactcaatgaagaagttgcattaaaattagaa ccaaatacagagtcactggaactttcttttaccatgccccagattcaggatcagccagca agtcctactgatggaagcagtagacaaagttcacctgagccaaacagtcccagtgagtat tgttttgatgtggacagtgtattcaagttggaattggtagagaaactttttgctgaagac acagaggcaaagaatccattttcgagtcaggacactgatttggacttggagatgctggcc ccctacatcccaatggatgacgacttccagttacgttcctttgatcagctgtcaccatta gaaaacaattctagtatgaacacagttacagtcttccagccaactccactgcaagaacct gccattaacaccaccactgccactgcaactgccactgccactgatgaattaaaaacagtg acaaaagatggtatggaagacgttaaaatattgcttgtatctccatctcctacccacgta cctaaagaaactactagtgacacaacatcatcatcatcatcttatagtggtactcaaagt cggacagtctcaccaaacatagcaggaaatggagtcatagaacagacagaaaaatctcat ccaagaagtcctaacgtggtatctgtcattttgagtcaaagaaatactgttcctgaggaa gaattaaatccaaagataatagctttgcagaatgctcagagaaaacgaaaaatggaacat gacggctcactttttcaagcagtaggaattggaacattattacagcaagcagatgaccaa acaactactacatcactttcctggaaacgtgtaaaaggatgcaagtctagtgaaccaaat ggagtggagcaaaagacaattattttaataccctctgatttagcatgtagactgctgggg caatcaatggatgagagtggattaccacagctgaccagctatgattgtgaagtgaacgcc cccatacaaggcagcagaaaccttctacaaggggaagacttactcagagctttggatcaa gttaactga

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