Dipodomys ordii (Ord's kangaroo rat): 105985617
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Entry
105985617 CDS
T07834
Symbol
Dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105985617 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105985617 (Dhx36)
03012 Translation factors [BR:
dord03012
]
105985617 (Dhx36)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105985617 (Dhx36)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105985617 (Dhx36)
Translation factors [BR:
dord03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105985617 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
PhoH
ResIII
DUF6782
AAA_23
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
105985617
NCBI-ProteinID:
XP_012871684
Ensembl:
ENSDORG00000004848
UniProt:
A0A1S3F6N6
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MDERREEQIVQLLNSVQAKSDKDPEAQISWFAPEDHGYGAEVSAEKKTNSEKKVDKQEKK
LMSQEKKILRIRDKSTFERDSEYLLQENEPDATLDQKLLEDLQKKKSDARYIEMQRFREK
LPSYGMQKELVTLIDKHQVTVISGETGCGKTTQVTQFILDSYIERGMGSACRIVCTQPRR
ISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSLLS
SVSHIVLDEIHERNLQSDVLMTVVKDVLNYRSDLKVILMSATLNAEKFSEYFGNCPMIHI
PGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRGFLQGHVNRREKEEKEAIYKERWPDY
IRELRGRYSPSTISALEMMDDDKVDLNLIAALIRHIVLKEEDGAILVFLPGWDNISSLHD
LLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYV
IDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY
QLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSSEAVLLSVKHLMELNALDKQEEL
TPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRK
ELAKETRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHDMKGQFAEHLL
GAGFVSSRSPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGL
VAIHPKSVNVEQTDFRYNWLMYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE
TIAVDEWIVFQSPARIANLVKELRKELDMLLQEKIENPHPVDWKDKASRDCAVLSAILDL
IKTQEKAVSRSLPPRHQDGWSS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagacgagaagagcaaatcgtgcagctgctgaactctgtccaagctaagagt
gataaagaccctgaagctcagatttcctggtttgctcctgaggatcatggatatggtgct
gaagtttctgctgagaaaaaaacaaactcagagaagaaagttgacaaacaggaaaagaaa
ttgatgagccaagaaaaaaagatacttagaattagggataaatccacctttgaacgagat
tctgagtatcttttgcaagaaaatgaaccagatgcaaccttagaccaaaaattactggaa
gatttacaaaagaagaaaagtgacgctcggtatattgagatgcagcgtttcagagaaaag
ctgccttcctatggaatgcagaaggagttggtgactttgattgataagcatcaggtaacc
gtgataagtggtgaaactggttgtggcaaaaccacccaggtcactcagttcatcttggac
agctacattgaacggggcatgggctctgcgtgcaggattgtctgtacccaaccacggagg
atcagcgccatctctgttgcagagcgagtggctgctgagagggcagagtcctgtggcaat
ggtaatagcactggataccagattcgtctccagagtcggttgccgagaaagcagggttcc
atcttgtattgtaccacaggaatcatcctgcagtggctccagtcagactcgcttttgtcc
agtgttagtcatattgtacttgatgaaattcatgaaagaaatctgcagtcagacgtttta
atgactgttgttaaagacgttcttaattaccgctctgacctaaaagtcattttgatgagt
gcaacattgaatgctgagaagttctcagaatattttggaaactgtccaatgatacacatt
cctggtttcactttcccggttgtggaataccttctggaggatatcattgaaaaaataaga
tatgtgccagaacagaaagagcacagatcccagtttaagaggggtttcctgcaaggccat
gtaaatagaagagaaaaagaagaaaaggaagcaatctataaggagcgctggccagactat
atacgagaactgagaggaaggtattctccaagtaccatcagtgctttggaaatgatggat
gatgataaagttgatctgaatttgattgctgctctgattcgacacattgttttgaaagaa
gaggatggagcgattctagtcttcctgcctggctgggacaacatcagcagtctacatgat
ctcctgatgtcccaggtgatgtttaagtcagataagtttattattatccctctacattca
ctaatgccaacggtaaaccagacacaggtgtttaaaagaactcctcctggtgttcggaaa
atagtaattgctaccaatattgcagagactagcatcaccattgatgacgtagtgtatgtg
atagatggaggaaaaattaaagaaacacattttgacactcagaacaacatcagcacgatg
gctgccgaatgggtcagtaaagcaaatgccaaacagaggaaaggccgcgctggcagagtc
cagcctggtcactgctatcatctgtataatggccttagagccagtcttctagatgactat
cagctgccagagattctaagaacgcctctggaagaactttgtttgcaaataaagatctta
aggcttggtggaattgctcattttctgagtcggttaatggaccctccgtccagcgaggca
gtgctgctctccgtaaaacacctcatggagctgaatgctttggacaaacaggaagaattg
acccctcttggtgtccacttggcccgattgccagttgagccacacatcgggaagatgatt
ctcttcggagctcttttctgttgtttagacccagtgctcactattgcggctagtctcagc
ttcaaagatccctttgtgattccattggggaaagaaaagattgcagatgccagaagaaag
gaactggcaaaggaaactagaagtgatcacctgacagttgtaaatgcatttgagggctgg
gaagaagctaggcggcgtgggttcagatacgaaaaggattactgctgggaatatttcctc
tcttcaaatacactgcagatgctgcatgacatgaaagggcagtttgctgagcacctgctt
ggagctgggtttgtaagcagcaggagccccaaagaccccaaatccaatataaactcagat
aatgagaagataatcaaagctgtcatctgtgctggcttatatcccaaagttgctaaaatt
cgactaaatctgggtaaaaaaagaaaaatggtgaaagttcataccaagtctgatggtctg
gttgcgattcaccccaaatcagtgaacgtggagcagaccgacttccgctacaactggctc
atgtaccacctcaagatgaggacgagcagtatctacttgtatgactgcaccgaggtctcc
ccatactgcctcttgttcttcggtggcgacatctccatccagaaggacaacgaccaggaa
accatcgctgtggacgaatggattgtgttccagtccccagccagaattgccaacctcgtg
aaggagttaaggaaggaactggacatgctgctgcaggagaagatcgagaaccctcaccct
gtggactggaaggacaaagcatccagagactgtgccgtgctctctgctattctggactta
atcaaaacccaggagaaggccgtttcccggagcctgcctccccgccaccaggacggatgg
agcagctga
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