Dipodomys ordii (Ord's kangaroo rat): 105985853
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Entry
105985853 CDS
T07834
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03030
DNA replication
dord03420
Nucleotide excision repair
dord03430
Mismatch repair
dord03440
Homologous recombination
dord03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105985853 (Rpa1)
03420 Nucleotide excision repair
105985853 (Rpa1)
03430 Mismatch repair
105985853 (Rpa1)
03440 Homologous recombination
105985853 (Rpa1)
03460 Fanconi anemia pathway
105985853 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dord03000
]
105985853 (Rpa1)
03032 DNA replication proteins [BR:
dord03032
]
105985853 (Rpa1)
03400 DNA repair and recombination proteins [BR:
dord03400
]
105985853 (Rpa1)
Transcription factors [BR:
dord03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105985853 (Rpa1)
DNA replication proteins [BR:
dord03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105985853 (Rpa1)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105985853 (Rpa1)
MMR (mismatch excision repair)
105985853 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
105985853 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
105985853
NCBI-ProteinID:
XP_012872015
Ensembl:
ENSDORG00000006199
UniProt:
A0A1S3F6Y9
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGQLSEGAIAAIMQQGNTSIKPILQVINIRAITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNSLVEQEQLSSNCICQINRFIVNTLKDGRRVIILMELDVLKSAEAVGLKIGNPVPYNE
GHGQQQVVPSTVSAASPVVSKPQQQNGSSGAGSTVSKMYGASKTFGKPAGTGLSHPSGGA
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVVPCEDDHHLPTVQF
DFTGIGDLENKSKDALVDILGICKNYEDATKITIKSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIMNPDIPEAYKLRGWFDSEGQ
ALDGVSISDQRGGGTGGSNTNWKTLYEVKLENLGQGDKADYFSSVATVVYLRKENCMYQA
CPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAIL
GQNAAYLGELKEKNEQAFDEVFQNANFRTFTFRVRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLVTLIRKNALL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagtgaaggggccattgcggccataatgcaacagggaaacacttct
atcaaacccatcctccaagtcattaatatccgtgctattactacaggcaatagtccaccc
cgttaccgactgcttatgagtgatggattgaacaccctgtcctcttttatgttggcaacc
cagttgaactcccttgttgagcaggaacaattgtccagcaactgtatttgccagattaac
agatttatcgtcaacactctgaaagatggaaggagagtaattattttgatggagttagac
gttttgaagtccgcagaagcagttggattaaagatcggcaatccagtgccctataatgaa
ggacatggacaacagcaagtagtgccttctacggtctcagcagccagcccagtggtcagc
aaacctcagcaacagaatgggagctcaggagcaggttcaactgtatctaagatgtatggt
gcctcaaagacatttggaaaacctgctgggacgggcctctcacacccttctgggggagca
caggccaaagtcgtgccaatcgccagcctcaccccttaccagtccaagtggaccatttgt
gctcgtgtcaccaataaaagtcagatccgtacttggagcaattcccggggggaagggaag
cttttctctctagaacttgtggatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttcttccctcttattgaagtgaataaggtgtattatttctcaaaaggc
accctgaagattgctaacaaacagttctcagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcgtgccctgcgaagatgatcatcacttgcccacagttcagttt
gatttcacagggattggtgacctagagaacaagtctaaagatgcacttgtagacatacta
gggatctgcaagaactatgaagatgccactaagatcactatcaagtctaacaacagagaa
gttgctaagaggaacatctatctgatggatacatcagggaaagtggtgactgctacgctg
tggggggaagatgcagacaagtttgatgggtccagacagccggtaatggccatcaaaggg
gcgagagtctctgattttggtggacggagcctctccgttctgtcttcaagcactatcatt
atgaatcctgacatcccagaggcctataagctgcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctctgatcaaaggggtggaggaacaggaggcagcaacacc
aactggaaaactttatatgaggttaaattggagaacctgggccaaggtgacaaggcggac
tatttcagctctgtagccacggtagtgtatcttcgcaaagagaactgtatgtaccaagcc
tgcccatctcaggactgcaataagaaagtgattgaccagcagaatggcctgtatcgctgt
gaaaagtgtgaccgggaatttcctaacttcaaataccgcatgatcttgtcggccaatatt
gccgattttcaagagaatcagtgggtgacttgtttccaggagtcagctgaagcgatcctt
ggacagaatgctgcttaccttggggaactcaaagagaagaatgagcaggcatttgacgaa
gttttccagaatgccaacttccgaactttcaccttcagagtcagggtcaaactggagacc
tataatgacgagtctcgaattaaggccactgtgatggacgtgaagcctgtggactacaga
gagtatggccggaggctggtcacactcatcaggaagaatgccctgctgtga
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integrated database retrieval system
