Dipodomys ordii (Ord's kangaroo rat): 105986244
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Entry
105986244 CDS
T07834
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dord03009
]
105986244 (Ddx21)
03036 Chromosome and associated proteins [BR:
dord03036
]
105986244 (Ddx21)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105986244 (Ddx21)
Ribosome biogenesis [BR:
dord03009
]
Eukaryotic type
Pre-60S particles
Helicases
105986244 (Ddx21)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105986244 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
105986244
NCBI-ProteinID:
XP_012872512
Ensembl:
ENSDORG00000002202
UniProt:
A0A1S3F9H7
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MPGKLRSDAELESDTAVEKMEPLRKQNEKKIRKEKPKPKKTEESSEIQEEAVSPKTKKKK
TRSSEVDMSSPKSKKAKKQEESCQDDSISSKTQNAKKKKELIDKKVVSPKTKKVQKSEVA
SEAPKPKKMKKEKEVNGEIGEKSPKLKNGLSHSEPDSHSSEAASEENSETEQEIPVEQKE
GAFSNFPISEETIKHLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLI
EKLQGGLQDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLSVACFYGGTPYGGQIERM
RNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDS
EDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAVTVEHLAIKCHWTERAA
VIGDVIRVYSGHQGRTIIFCETKKEAQELSQSSAMKQEAQSLHGDIPQKQREITLKGFRN
GNFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKE
EYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAISKLIIDLHAVLRINIIQFLVYSVHF
PTVGFVTMILQCSIEMPNISYAWKELKEQLGESIDSKIKGMVFLKGKLGVCFDVRTAAVT
EIQEKWHDSRRWQLSVATEQPELEGPPEGFRGGRGQRDGSRGGRGQRDGSRGFRGQRNGT
RNFRGQRGGNRSFRGQQSGGNQSNRGQKRSFSKAFGQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgcagcgacgctgaattggaatcagacacggctgtggaaaagatg
gagccactgcggaagcaaaatgagaagaaaattagaaaagaaaagccaaaacccaagaag
actgaagagtcatcagaaattcaggaagaagctgtatcccctaaaactaaaaaaaagaaa
actaggtcttctgaagttgatatgagttctcctaaatccaaaaaggcaaaaaagcaagag
gagtcatgtcaggatgatagtatttcttctaaaactcagaatgctaaaaagaaaaaggaa
ctcattgacaagaaagttgtctcccctaaaactaagaaagtgcaaaaaagtgaggtggct
tctgaagctcctaagcccaagaaaatgaagaaagaaaaagaagtgaatggagaaattgga
gagaaaagtcccaaattgaagaatggactctctcattctgaacctgactctcactccagt
gaagctgccagtgaagaaaacagtgagacagagcaggaaatacccgtggaacaaaaagaa
ggagctttctctaattttcccatatctgaagagactatcaagcatctcaaagcccgtggg
gtgaccttcctgtttcctatacaagcaaagacatttcaccatgtctatagtggaaaagac
ttaattgcacaggcacggacaggaactgggaagacattctcctttgccatccctttgatt
gagaaactacagggtggtctgcaagacaggaagagaggccgagcgcctcaggtacttgtt
cttgcacctacaagagaactggcaagtcaagtcagcagagacttcagtgacatcacaaaa
aagctatctgtggcttgcttttatggtggaactccctatggaggtcaaattgagcggatg
cggaatgggattgatatcctcgttgggaccccaggtcgaatcaaagaccacctacagaac
ggcaaactcgatctcaccaagcttaagcatgttgtgctggatgaagttgaccagatgttg
gatatgggttttgcagatcaagtagaagagatcttatgtgtggcctacaaaaaagattct
gaagacaatccccaaacattgcttttttctgcaacttgccctcattgggtatttaatgtt
gctaagaaatacatgaaatctacatatgaacaggtggacctgattggtaaaaagactcag
aaaacagcagtaactgtggagcatttagctatcaagtgtcactggactgagagggcagca
gttattggggatgtgatccgagtgtacagtggtcatcaggggcgcacgatcatcttctgt
gaaaccaagaaagaagcccaagaactatcacagagttcagcgatgaagcaggaagcgcag
tcattacatggagacattccacagaagcaaagggaaatcaccttgaaaggttttagaaat
ggtaattttggagttttggtggcaaccaatgtcgctgcacgtggtttagacatccctgaa
gttgatttggttgtacagagttctccaccaaaggatgtggaatcctacattcatcgttct
gggcgcacaggtcgagctggaaggacaggggtgtgcatctgcttctatcagcacaaggaa
gaataccagttagcacaagtggaacaaaaagcgggaattaaatttaaacgaataggtgtt
ccttctgcaacagaaataataaaagcttccagcaaagatgccatcagtaagctgattata
gatctacatgcagttttaaggattaacattattcaatttcttgtatactctgtccatttt
cctacagtgggttttgtgaccatgatcctgcagtgctcaattgaaatgccaaacattagt
tatgcttggaaagaacttaaggagcagctaggcgagagcatcgattccaaaataaaggga
atggtcttcctcaagggaaagctgggtgtttgttttgatgtacgtactgcagctgtcaca
gaaatacaggagaaatggcatgactcacgacgttggcagctctctgtggccacagagcaa
ccagagctggaaggaccaccagaaggattccgaggcggcaggggacagcgagatggcagc
cgaggtggcaggggacagcgagatggcagccgaggtttcaggggacagcggaacggaacc
agaaacttcaggggacagcggggcggaaatagaagtttcaggggacagcagtcaggtggc
aaccaaagtaatagagggcagaagcggagtttcagtaaagcatttggtcagtga
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