Dipodomys ordii (Ord's kangaroo rat): 105986600
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Entry
105986600 CDS
T07834
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105986600 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105986600 (Taf5)
03036 Chromosome and associated proteins [BR:
dord03036
]
105986600 (Taf5)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105986600 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
105986600 (Taf5)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105986600 (Taf5)
STAGA complex
105986600 (Taf5)
TFTC complex
105986600 (Taf5)
SAGA complex
105986600 (Taf5)
SLIK complex
105986600 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
VPS8_N
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
105986600
NCBI-ProteinID:
XP_012873050
Ensembl:
ENSDORG00000010418
UniProt:
A0A1S3F9V6
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGSGAPNNGPNGGVGSVAVEDQPDVS
AVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENE
AKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKR
HLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGLLKE
PEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLD
KIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV
TPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLL
SSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP
LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP
NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD
AIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSP
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagaacccgagggtccg
ccgacgctgctgcctcctcaggcgggcgatggcgcgggcgagggcggcagcggcgctccc
aacaacggccccaacggcggcgttggaagtgtagctgtggaagaccagccagatgtcagt
gctgtcttgtcggcctacaaccaacaaggagaccccacaatgtatgaagagtactatagt
ggactgaaacacttcattgaatgttctctggactgccatcgggcagaattatcccaactc
ttttatcctctgtttgtacacatgtacttggagctagtctataatcaacatgaaaatgaa
gcaaaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgaaaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggcttgttaaaagaa
ccagaaattgaagtgcctttagatgatgaagatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaagcccaaaaaagatagtattggatccaaaagcaaaaaacaagatccc
aatgctccacctcaaaacagaattcctcttcctgagctgaaagattcagataaattggat
aagatcatgaatatgaaagaaaccaccaaacgagtacgacttgggccggactgcttacct
tctatttgtttctatacattcctaaatgcttaccagggcctcactgcagtggatgtcact
gatgattctagtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtg
acacccaaaaagcttcgtagtgttaaacaagcatcagatcttagcctcatagacaaagaa
tcagatgatgtcttagaaagaatcatggatgagaaaactgcaagtgagttgaagattttg
tatggtcacagtgggcctgtctatggagccagcttcagtcccgataggaattacctgctt
tcctcttcagaggatggaactgttagattatggagccttcaaacatttacttgcttggtg
ggatataaaggacacaactacccagtatgggacacacagttttctccatatggatattat
tttgtgtcagggggccatgaccgagttgctcgactctgggccacagaccactatcagcct
ttaaggatatttgctggccatcttgctgatgtgaattgtacaagattccatcccaattca
aattatgtggctactggctccgcagacagaactgtgcggctctgggatgttttgaatggt
aactgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacagatggcagagtactcctttgggatattgga
catggtttgatggttggagaattaaaaggccatactgatacagtctgttcacttagattt
agtagagatggtgaaattttggcctcaggttcaatggataatacagtccggttatgggat
gccataaaagcatttgaagatttagagactgatgactttactacagccactggccatata
aatttacctgagaattcacaggagttattattgggtacatatatgaccaaatcaacacca
gttgtacacctccattttactcgaagaaacttggttctggctgcaggagcttatagtccg
caataa
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