Dipodomys ordii (Ord's kangaroo rat): 105986780
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Entry
105986780 CDS
T07834
Symbol
Hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105986780 (Hps1)
Membrane trafficking [BR:
dord04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
105986780 (Hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
105986780
NCBI-ProteinID:
XP_012873335
Ensembl:
ENSDORG00000003804
UniProt:
A0A1S3F9X4
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MKCVLVATEGAEVLFYWTDEEFEESLRLKFGHTENEEEELPALEDQLSTLLAPVIISSMT
MLEKLSDTYTCFSTENDDHLYVLHLFGECLFIAINGDHMENEADLRRKLCVLKYLFEVHF
GLVTMDSQLIRKELRPPDLEQRVQVWARFQSLLRTYNHLREQEQSFAVEAVERLIHPQLC
ELCIEALERHVVQAVNSKPAQGSEEAQHAFLLVHNKLLAFYSSHGASTLRPADLLALILL
VQDLHPSPITVDEEEDGTQPFPQRRPRSSQSIPVQRAWSVDSTGPTGPSHPTAESSAETD
PDIPEEYFTPAPSPSEQSSGSTVWLDGNTSPMDVSQIAEESPQALVPHSSAPSSHRRIFL
DANVKENYCPLVPHTMYCLPLWPGINMVLLTKSSSTPLALVLYQLLDGFSLLEKKLKEGQ
EARSALRSQPLVGDLRQRMDKFVKNRGGQEIQNTWLEFKTKAFSKSEPGSSWELLQVCGK
LKRQLCAFYRLSFLATAPSRGGPHLSPHLQDQLQRIMRERLLDWKDFLLVKSRRNITMVS
YLEDFPGLVHFIYVDRTTGKMVAPSLSSSEKTSSELGKGPLAAFVKDKVWALVRMARRYL
QKGCTTLLFQDGDFRCSYFLWFENDTGHRLQMIEVPVLSDDSVPIGVLGGDYYRKLLRYY
SKSRPAEAVRCYELLALHLSVIPTELLVQQAGLLVRRLGEASRAPLP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtgtcttggtggccacagagggtgcagaggtcctcttctattggacagatgag
gagtttgaagagagtctccggctaaagtttgggcatacagagaatgaggaagaggagctc
cctgcgctggaggaccagctgagcactctcctggctcccgtcatcatctcctccatgaca
atgctggagaaactctcagacacatacacctgcttctccacggaaaatgatgatcacctg
tatgtccttcacctgtttggagagtgcctgttcatcgccatcaatggggaccacatggag
aatgaggcagaccttcgacggaaactgtgtgtgctcaagtacctgttcgaggtgcacttc
gggctggttactatggacagccagctcatccgaaaggagctgcggccccctgacctagag
caacgtgtgcaggtgtgggcacgcttccagagcctgctgaggacctacaaccacctgagg
gagcaggagcagagcttcgcggtggaggctgtggagcggctgattcatccccagctttgt
gaactgtgcatagaggcactggagcgacacgtcgtccaggctgtcaactccaagcctgcg
cagggcagcgaggaggctcagcacgccttcctgctagtccacaacaagctgctggccttc
tactccagccatggtgccagcaccctgcgccctgctgaccttctggccctcatcctcctg
gtgcaggacctccaccccagcccaatcacagtggacgaagaggaggacggcacccagcct
ttcccacagcggaggcctcggagcagccagagcatcccggtgcagcgggcctggagcgtg
gacagcacgggccccacaggcccctcccaccccacggcagagagctctgcagagacggac
cctgacatccccgaggaatacttcacaccagctccttctcccagtgaacagagctcaggt
agtactgtctggctggatggcaacacctcacccatggatgtatctcagatagctgaagaa
tccccccaggccctggttcctcactcctcagcaccttccagccataggaggatcttcttg
gatgccaacgtaaaggagaactattgccccttggtgccccacaccatgtactgccttcct
ctgtggccaggcattaacatggtgcttctgaccaagagttccagcactccacttgctctg
gtcctgtaccagctgctagatggcttctccctgctggagaagaagctgaaggagggccag
gaggccaggagtgccctccgctcccagccccttgtgggagacctacgccagaggatggac
aagttcgtcaagaatcgagggggacaggagattcagaacacctggctggagtttaagacc
aaggccttctccaaaagtgaaccaggatcatcctgggagctgctccaggtctgtgggaag
ctaaagcggcagctctgcgcattctaccgtctcagcttcctggccacggcccccagcagg
ggaggcccacacctgtccccgcacctgcaggaccagctccagaggatcatgcgggagagg
ctgctggactggaaagacttcctgttggtgaagagcagaaggaacatcaccatggtgtcc
tacctggaggacttcccaggcctggtgcatttcatctacgtggaccgcacaactgggaag
atggtggctccgtccctcagcagcagtgagaagacttcatcagagttgggcaagggaccg
ctggctgcctttgtcaaggacaaggtctgggctctagtccggatggcacgcaggtacctg
cagaagggctgtaccaccctgctcttccaggatggggacttccgctgctcctacttcctg
tggtttgagaatgacacgggccacagactgcagatgattgaagtgcctgtcctctcggat
gactccgttcccatcggcgtgctgggaggtgactactacaggaagctcctgcgctactac
agcaagagccgcccggctgaagccgtcaggtgctacgagctgctggccctgcacctgtcc
gtcattcccaccgaactgctggtgcagcaggccggcctgctagtccggcgcctgggggag
gcctcccgtgcacccctgccctag
DBGET
integrated database retrieval system
