KEGG   Dipodomys ordii (Ord's kangaroo rat): 105986810
Entry
105986810         CDS       T07834                                 
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord01524  Platinum drug resistance
dord03430  Mismatch repair
dord05200  Pathways in cancer
dord05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105986810 (Msh2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    105986810 (Msh2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    105986810 (Msh2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    105986810 (Msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dord03400]
    105986810 (Msh2)
DNA repair and recombination proteins [BR:dord03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     105986810 (Msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II AAA_27 FeoA
Other DBs
NCBI-GeneID: 105986810
NCBI-ProteinID: XP_012873363
UniProt: A0A1S3F9M9
LinkDB
Position
Unknown
AA seq 696 aa
MAYVVNYEFDEHNIIILHISNYGTNVFFLSVIQRAGILITERKRADFSTKDICQDLNRLL
KSKKGEQMNSSVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIA
AVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLDLVEA
FVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRLYQGINQLPNVIQALEKHE
GRHQVLLLAVFVTPFIELRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLTELRDVM
NDLEKKMQSTLIRAARDLGLDPGKQIKLDSNAQFGYYFRVTCKEEKVLRNNKNFTTVDIQ
KNGVKFTNSELSSLNEEYTKSKTEYEEAQNAIVKEIVNISSGYIEPMQTLNDVLAQLDAV
VSFAHVSNGAPVPYVRPDILEKGEGRIVLKASRHACVEVQDEVAFIPNDVRFDKEKQTFH
IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAKISIVDCILARVGAGDSQLKGVSTF
MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH
ELTALASQIPTVNNLHVTALTTEENLTMLYQVKKGECIALQGEKIIQEFLSKVKQVPFTE
MSEENITIKLKQLKAELIAKNNSFVNELISRIKLTT
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggcgtatgttgtgaactacgaatttgatgaacacaacatcattatcttacatataagc
aattatggtacaaatgtctttttcctttcagttattcagagagcaggaattctgatcaca
gaaagaaaaagagctgatttttccacaaaagacatttgtcaggacctgaaccggttattg
aaaagcaaaaagggagaacagatgaatagttctgtcttgccagaaatggagaatcaggtt
gcagtttcatctttgtctgcagtaatcaagtttttagagcttttatctgatgattcaaat
tttggacagtttgaactgactacttttgacttcagccagtatatgaaattggatattgca
gcagttagagcccttaaccttttccagggttctgttgaggatacaactggctctcagtct
ctggctgcattgctgaataaatgcaaaaccccgcaagggcaaagactagttaaccagtgg
attaagcagcctctcatggataagaacagaatagaagagagattagatttagtggaagct
tttgtagaagatgcagagttaaggcagagtttacaagaagatttgcttcgtcgattccca
gatcttaacagacttgccaagaaatttcaaagacaagcagcaaccttacaagattgttac
cgactttatcaggggataaatcaactccctaatgttatacaggctctggaaaaacatgaa
ggaagacaccaggtgttgttgttggcagtttttgtgactccatttattgagcttcgttct
gatttctccaaatttcaggaaatgatagagacaactttagatatggaccaggttgagaac
catgaatttcttgtaaaaccttcatttgatcctaatctgactgaattaagagacgtaatg
aatgacttagaaaagaagatgcagtccacattaatacgtgcagccagagatctgggattg
gaccctggcaaacagattaaattggattccaatgcacagtttggatattattttcgtgta
acctgcaaggaagaaaaagtccttcgtaacaataaaaactttactacagtagatatccag
aagaatggtgttaaatttaccaacagtgaactgtcttctttaaatgaagaatatactaaa
agtaaaacagagtatgaagaggcccagaatgccattgtaaaagaaattgtcaatatttct
tcaggttatatagaaccaatgcagacactcaatgatgtgctagctcagttagacgctgtt
gtcagctttgctcatgtttcaaacggagcacctgttccctatgttcgaccagatattttg
gagaaaggagaaggaagaattgtattgaaagcatccagacatgcttgtgttgaagttcaa
gatgaagttgcatttattcctaatgatgtacgctttgataaggaaaaacagacgttccac
atcattactggacccaatatgggaggtaaatcaacatatatccgccaaaccggggtaata
gtactcatggcccaaattgggtgtttcgtgccatgtgaatcagcaaaaatatccattgta
gattgcatcttggctcgagttggggctggtgacagtcagttgaaaggagtctccacgttt
atggctgaaatgctagaaacggcttctatcctcaggtctgcaaccaaagattctttaatt
atcatagatgaattgggaagaggaacctctacttatgatgggtttggcttggcctgggct
atatcagagtacattgcaacaaagattggtgctttttgcatgtttgcaacccattttcat
gaacttactgcactggccagtcagataccaactgtgaataatctacatgtgacagcatta
accactgaagagaatttaacaatgctttatcaggtcaagaaaggtgagtgtatagcacta
caaggtgaaaaaattatccaggagtttctatccaaggtgaaacaagtaccctttactgaa
atgtcagaagaaaacatcacaataaagctaaaacagctgaaagctgagttgatagccaag
aataatagctttgtaaatgaactcatttcacgaataaagcttactacgtga

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