Dipodomys ordii (Ord's kangaroo rat): 105986810
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Entry
105986810 CDS
T07834
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord01524
Platinum drug resistance
dord03430
Mismatch repair
dord05200
Pathways in cancer
dord05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105986810 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105986810 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
105986810 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
105986810 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105986810 (Msh2)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105986810 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
FeoA
Motif
Other DBs
NCBI-GeneID:
105986810
NCBI-ProteinID:
XP_012873363
UniProt:
A0A1S3F9M9
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MAYVVNYEFDEHNIIILHISNYGTNVFFLSVIQRAGILITERKRADFSTKDICQDLNRLL
KSKKGEQMNSSVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIA
AVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLDLVEA
FVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRLYQGINQLPNVIQALEKHE
GRHQVLLLAVFVTPFIELRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLTELRDVM
NDLEKKMQSTLIRAARDLGLDPGKQIKLDSNAQFGYYFRVTCKEEKVLRNNKNFTTVDIQ
KNGVKFTNSELSSLNEEYTKSKTEYEEAQNAIVKEIVNISSGYIEPMQTLNDVLAQLDAV
VSFAHVSNGAPVPYVRPDILEKGEGRIVLKASRHACVEVQDEVAFIPNDVRFDKEKQTFH
IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAKISIVDCILARVGAGDSQLKGVSTF
MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH
ELTALASQIPTVNNLHVTALTTEENLTMLYQVKKGECIALQGEKIIQEFLSKVKQVPFTE
MSEENITIKLKQLKAELIAKNNSFVNELISRIKLTT
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatgttgtgaactacgaatttgatgaacacaacatcattatcttacatataagc
aattatggtacaaatgtctttttcctttcagttattcagagagcaggaattctgatcaca
gaaagaaaaagagctgatttttccacaaaagacatttgtcaggacctgaaccggttattg
aaaagcaaaaagggagaacagatgaatagttctgtcttgccagaaatggagaatcaggtt
gcagtttcatctttgtctgcagtaatcaagtttttagagcttttatctgatgattcaaat
tttggacagtttgaactgactacttttgacttcagccagtatatgaaattggatattgca
gcagttagagcccttaaccttttccagggttctgttgaggatacaactggctctcagtct
ctggctgcattgctgaataaatgcaaaaccccgcaagggcaaagactagttaaccagtgg
attaagcagcctctcatggataagaacagaatagaagagagattagatttagtggaagct
tttgtagaagatgcagagttaaggcagagtttacaagaagatttgcttcgtcgattccca
gatcttaacagacttgccaagaaatttcaaagacaagcagcaaccttacaagattgttac
cgactttatcaggggataaatcaactccctaatgttatacaggctctggaaaaacatgaa
ggaagacaccaggtgttgttgttggcagtttttgtgactccatttattgagcttcgttct
gatttctccaaatttcaggaaatgatagagacaactttagatatggaccaggttgagaac
catgaatttcttgtaaaaccttcatttgatcctaatctgactgaattaagagacgtaatg
aatgacttagaaaagaagatgcagtccacattaatacgtgcagccagagatctgggattg
gaccctggcaaacagattaaattggattccaatgcacagtttggatattattttcgtgta
acctgcaaggaagaaaaagtccttcgtaacaataaaaactttactacagtagatatccag
aagaatggtgttaaatttaccaacagtgaactgtcttctttaaatgaagaatatactaaa
agtaaaacagagtatgaagaggcccagaatgccattgtaaaagaaattgtcaatatttct
tcaggttatatagaaccaatgcagacactcaatgatgtgctagctcagttagacgctgtt
gtcagctttgctcatgtttcaaacggagcacctgttccctatgttcgaccagatattttg
gagaaaggagaaggaagaattgtattgaaagcatccagacatgcttgtgttgaagttcaa
gatgaagttgcatttattcctaatgatgtacgctttgataaggaaaaacagacgttccac
atcattactggacccaatatgggaggtaaatcaacatatatccgccaaaccggggtaata
gtactcatggcccaaattgggtgtttcgtgccatgtgaatcagcaaaaatatccattgta
gattgcatcttggctcgagttggggctggtgacagtcagttgaaaggagtctccacgttt
atggctgaaatgctagaaacggcttctatcctcaggtctgcaaccaaagattctttaatt
atcatagatgaattgggaagaggaacctctacttatgatgggtttggcttggcctgggct
atatcagagtacattgcaacaaagattggtgctttttgcatgtttgcaacccattttcat
gaacttactgcactggccagtcagataccaactgtgaataatctacatgtgacagcatta
accactgaagagaatttaacaatgctttatcaggtcaagaaaggtgagtgtatagcacta
caaggtgaaaaaattatccaggagtttctatccaaggtgaaacaagtaccctttactgaa
atgtcagaagaaaacatcacaataaagctaaaacagctgaaagctgagttgatagccaag
aataatagctttgtaaatgaactcatttcacgaataaagcttactacgtga
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