Dipodomys ordii (Ord's kangaroo rat): 105986842
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Entry
105986842 CDS
T07834
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04517
IgSF CAM signaling
dord04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105986842 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105986842 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dord04812
]
105986842 (Sptbn1)
Cytoskeleton proteins [BR:
dord04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105986842 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
105986842 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
105986842
NCBI-ProteinID:
XP_012873392
Ensembl:
ENSDORG00000000885
UniProt:
A0A1S3FBR7
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSSHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
RESASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKASEEAESQQQWDTSKGEQVSQNGLPAEQGSPRMTDTVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacagtagccacagattacgacaacattgagatccaacagcagtacagcgat
gtgaacaaccgctgggatgtggatgactgggacaatgagaatagctctgcacggctcttc
gaacggtcccgcatcaaggctctggcagatgagcgtgaagccgtgcagaagaagaccttc
acgaaatgggtcaactctcaccttgcccgagtgtcctgtcggatcacagatctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaagtactctccggagagaggctg
cctaaacccaccaagggaagaatgcgcatccactgtctggagaatgtggacaaggccctc
cagttcctgaaggaacagagagtccatcttgagaacatgggttcccacgacattgtggat
gggaaccaccggctgacccttggcctcatttggaccatcatcttacgcttccagatccaa
gatatcagtgtagaaactgaagataataaagagaagaagtctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctggataccccaatgtcaacattcacaattttaccact
agctggagagatggtatggcgtttaatgcactaatacacaagcaccggcctgacctgata
gattttgataaattgaagaaatccaatgcacactacaatcttcagaatgcatttaacctg
gcagagcagcacctcggcctcactaaactgttggatcctgaagatatcagtgtggaccac
cctgatgagaagtctattatcacttacgtggtgacttactaccactacttctctaagatg
aaggccttggctgttgagggaaaacgaattggaaaggtgcttgacaacgccattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgaccttttggaatggattgaacaa
accatcattattctgaacaatcgcaaatttgccaattctctggtcggggttcaacagcag
cttcaggcattcaacacttaccgcactgtggagaaaccacccaaatttactgaaaaggga
aacttggaagtgctactcttcactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccgagagagggcaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagcgagaactggccctgcgcaatgagctcataagacaagagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacttggctaagcgaa
aaccagcgcctggtatcccaggacaactttggatttgaccttcccgcagttgaagccgcc
acaaaaaagcacgaggccattgagacagacattgccgcatacgaggaacgtgtgcaggct
gtggtggccgtggccagggagcttgaggcagagaactaccatgacatcaagcgcatcacc
gcgaggaaggacaatgtcatccggctctgggagtacctgctggaactgctcagagctagg
agacagcgtctcgagatgaacttaggcttgcaaaaaatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattatctcaagactatggcaaacacttg
cttggtgtggaggacctgttacagaagcatgctctcgttgaagcagacattggaatccag
gcagagcgtgttaggggtgtcaatgcctctgcccagaaatttgcaacagatggggaaggc
tacaagccctgtgaccctcaagtgatccgagaccgcgtggctcacatggagttctgctat
caagagctttgccagctagcagctgagcgccgggcccgcctggaagagtcccgccgtctc
tggaagttcttctgggagatggcagaagaggaaggctggatccgagagaaggagaaaatc
ctgtcctctgatgattatgggaaagacctgaccagtgtcatgcgcctgctcagcaagcac
cgggcatttgaggacgagatgagcggccgcagcagccatttcgagcaggctatcaaagaa
ggtgaagatatgattgcggaggagcactttggatcagaaaagatccgtgagaggatcatt
tacatccgggagcaatgggccaacttggaacagctctcagctattcggaagaagcggctg
gaggaggcctcacttctacatcagttccaggcagatgccgatgacattgatgcctggatg
ctggacatcctcaagatagtctccagcaacgatgtgggccacgacgagtactccacacag
tctctggtgaaaaaacacaaggatgtggctgaggagatcaccaattacaggcccacaatc
gacacgctgcatgagcaagccagcgccctcccccaggctcacgcggagtctccagatgtg
aggggacggctggcgggcattgaagagcgctacaaggaagtggcagagctcacgcggctg
aggaagcaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggctgatgcc
tgtgagctctggattgatgagaaggagcagtggctcaataatatgcagatcccagagaaa
ctggaggacctagaagtcatccagcacaggtttgagagcctcgaaccagaaatgaacaac
caggcttcccgggttgctgtagtaaaccagattgcacgtcagctgatgcacagtggccat
cccagtgagaaggaaatcaaagcccaacaggacaaactcaatacaaggtggagtcagttc
agagaactggttgacaggaagaaggatgctcttctgtctgccctgagcatccaaaactat
catcttgagtgcaatgaaaccaaatcttggattcgagaaaagaccaaagttattgaatct
acccaggacctaggcaacgacctggctggagtcatggccctacagcggaagctgactggc
atggagcgagacttggttgccatcgaggcaaagctgagtgacctgcagaaggaggcagag
aagctggagtctgagcaccccgaccaggctcaggcaatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccaccctgaagaaccgagaggcctccctgggagaa
gccagcaagctgcagcagttcctacgggacttggatgacttccagtcgtggctctccagg
acccagacagccatcgcctctgaggacatgcccaacaccctgaccgaggcagagaagctt
ctcacacagcatgaaaatatcaaaaatgagatcgacaactatgaggaggactaccagaag
atgagggacatgggtgagatggtcacccagggacagactgatgcccagtacatgtttctg
cgccagcggctacaggccttggacactggctggaatgaactccacaaaatgtgggagaac
aggcaaaatctcctctcccagtcccacgcctaccagcagttcctgagggacacaaagcaa
gccgaagcctttcttaacaaccaggagtatgttttggctcatactgaaatgcccactacc
ctggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aacgaggagaagatcaatgctgttgtggagacaggccggaggttggtgagcgatggaaac
atcaattccgatcgcatccaagaaaaagtggactccattgatgacagacacaggaagaat
cgtgagtcagccagtgaacttctgatgagattgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaagagctttctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatctgcacagtaaatggctgaagcaccaagcatttatg
gcagaacttgcatctaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacggaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccactcagaccaaggcccagcggctctttgatgcaaac
aaggctgaactttttacccagagctgcgcagatctggataaatggctccatggcttggag
agtcagattcagtcggacgattatggcaaagaccttaccagcgtcaacatcctgctgaaa
aagcaacagatgctggagaaccagatggaagtacggaagaaggaaattgaggagcttcag
agccaggcccaagcgctgagtcaggaagggaagagcaccgatgaggtagacagcaagcgc
ctcactgtgcagaccaaattcatggagctgctcgaacccttgaatgaaaggaagcataat
ctgctggcctccaaagagatccatcagttcaacagagatgtggaggacgagatcttgtgg
gttggtgagaggatgcctttggcaacttccacagatcacggccacaacctccagactgtt
cagctgctaataaagaaaaaccagaccctccagaaagaaatccaggggcatcagcctcgc
attgatgacatctttgagagaagccaaaatatcgtcactgacagcagcagcctcaatgcg
gaggccatcagacagagactcgccgacctgaagcagctgtggggcctcctcatcgaggag
acggagaaacgccaccgacgccttgaggaggcacacaaggcccagcaatattactttgac
gccgctgaagcggaagcgtggatgagcgagcaggagctgtacatgatgtctgaggagaag
gccaaggatgagcagagtgctgtctccatgttgaagaaacaccaaattttagaacaagcc
gtggaagactatgcagagacagtacaccagctctccaagacaagccgggcattggtggct
gacagccatcctgaaagtgagcgcattagcatgcggcagtccaaagtagataagctatat
gctggcctgaaggaccttgctgaagagaggagaggcaagctagatgagaggcacaggcta
ttccagctcaaccgggaggtggatgacctagagcagtggattgctgagagggaggtggtc
gcaggatcccatgaactggggcaggactacgagcacgtcaccatgttgcaagaacgattc
cgggaatttgctcgagacacagggaacattggacaggaacgtgtggatacggtcaatcac
atggcagatgatctcatcaactctggacactcagatgctgccaccatcgctgaatggaag
gatggccttaatgaagcctgggctgatctgctggagctcattgacacgagaacacagatt
ctggctgcctcctatgaactgcataagttttatcatgatgccaaggaaatctttgggcgt
atccaagataaacacaagaaactccctgaggagcttgggagagatcagaacaccgtggag
accttacagcgaatgcacaccacctttgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaggatgcagctcgcctccaggcagcctatgcgggtgacaaggctgac
gacatccagaagcgtgagaacgaggtcctggaagcctggaagtcgctcctggacgcctgt
gagggccgcagggtgcggctggtggacacaggggacaagttccgcttcttcagcatggtg
cgggacctcatgctttggatggaggatgtcatccggcagatagaagcccaggagaagcca
agggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaatgacagtttcacaacctgtattgaacttgggaaatccctgctggctaga
aaacactatgcatctgaggagatcaaagaaaagttactacagttgacggaaaagagaaaa
gaaatgattgacaagtgggaagacagatgggaatggttaagactgattttggaggtccat
cagttctcaagggacgccagtgtggccgaggcttggctgcttggacaggagccctaccta
tccagccgcgaaatcggccagagtgtggatgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagcgacctgggacgagaggttctccgccctggaaaggctaaca
acattggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggcca
ccttctccagagccaagcacaaaggcttcggaggaggccgagtcccagcagcaatgggat
acttcaaaaggagagcaagtttcccagaatggtttgccggctgagcagggatcgccacgg
atgacagatacggtggacaccagtgaaatggtcaatggcgctgctgaacagaggacgagc
tccaaagagtccagtcctatcccctccccgacctctgaccgcaaggccaagactgcactc
ccagcccagagtgccgccaccctgcccgccaggacgcaggagacacccgcggcccagatg
gaaggcttcctaaaccggaagcacgagtgggaggcccacaacaagaaagcctcaagcagg
tcctggcacaatgtatattgtgtcataaataaccaagaaatgggtttctacaaagacgcc
aagaccgctgcttccggcatcccttaccacagcgaggtccctgtgagtttgaaggaagcc
gtctgtgaagtggcccttgactacaagaagaagaaacacgtgttcaagctcagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacgtggatccag
gccatctcctctgctatctcctctgacaaacatgacctgtctgccagcacccagagcaca
ccagcctcgagccgggcgcagaccttacccaccagcgtggtcaccatcaccagcgagtcc
agtcccggcaaacgggagaaggacaaagagaaagacaaagagaagcgcttcagccttttt
ggcaaaaagaagtga
DBGET
integrated database retrieval system
