Dipodomys ordii (Ord's kangaroo rat): 105986842
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Entry
105986842 CDS
T07834
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105986842 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dord04812
]
105986842 (Sptbn1)
Cytoskeleton proteins [BR:
dord04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105986842 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
105986842 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
105986842
NCBI-ProteinID:
XP_012873392
Ensembl:
ENSDORG00000000885
UniProt:
A0A1S3FBR7
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSSHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
RESASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKASEEAESQQQWDTSKGEQVSQNGLPAEQGSPRMTDTVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacagtagccacagattacgacaacattgagatccaacagcagtacagcgat
gtgaacaaccgctgggatgtggatgactgggacaatgagaatagctctgcacggctcttc
gaacggtcccgcatcaaggctctggcagatgagcgtgaagccgtgcagaagaagaccttc
acgaaatgggtcaactctcaccttgcccgagtgtcctgtcggatcacagatctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaagtactctccggagagaggctg
cctaaacccaccaagggaagaatgcgcatccactgtctggagaatgtggacaaggccctc
cagttcctgaaggaacagagagtccatcttgagaacatgggttcccacgacattgtggat
gggaaccaccggctgacccttggcctcatttggaccatcatcttacgcttccagatccaa
gatatcagtgtagaaactgaagataataaagagaagaagtctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctggataccccaatgtcaacattcacaattttaccact
agctggagagatggtatggcgtttaatgcactaatacacaagcaccggcctgacctgata
gattttgataaattgaagaaatccaatgcacactacaatcttcagaatgcatttaacctg
gcagagcagcacctcggcctcactaaactgttggatcctgaagatatcagtgtggaccac
cctgatgagaagtctattatcacttacgtggtgacttactaccactacttctctaagatg
aaggccttggctgttgagggaaaacgaattggaaaggtgcttgacaacgccattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgaccttttggaatggattgaacaa
accatcattattctgaacaatcgcaaatttgccaattctctggtcggggttcaacagcag
cttcaggcattcaacacttaccgcactgtggagaaaccacccaaatttactgaaaaggga
aacttggaagtgctactcttcactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccgagagagggcaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagcgagaactggccctgcgcaatgagctcataagacaagagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacttggctaagcgaa
aaccagcgcctggtatcccaggacaactttggatttgaccttcccgcagttgaagccgcc
acaaaaaagcacgaggccattgagacagacattgccgcatacgaggaacgtgtgcaggct
gtggtggccgtggccagggagcttgaggcagagaactaccatgacatcaagcgcatcacc
gcgaggaaggacaatgtcatccggctctgggagtacctgctggaactgctcagagctagg
agacagcgtctcgagatgaacttaggcttgcaaaaaatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattatctcaagactatggcaaacacttg
cttggtgtggaggacctgttacagaagcatgctctcgttgaagcagacattggaatccag
gcagagcgtgttaggggtgtcaatgcctctgcccagaaatttgcaacagatggggaaggc
tacaagccctgtgaccctcaagtgatccgagaccgcgtggctcacatggagttctgctat
caagagctttgccagctagcagctgagcgccgggcccgcctggaagagtcccgccgtctc
tggaagttcttctgggagatggcagaagaggaaggctggatccgagagaaggagaaaatc
ctgtcctctgatgattatgggaaagacctgaccagtgtcatgcgcctgctcagcaagcac
cgggcatttgaggacgagatgagcggccgcagcagccatttcgagcaggctatcaaagaa
ggtgaagatatgattgcggaggagcactttggatcagaaaagatccgtgagaggatcatt
tacatccgggagcaatgggccaacttggaacagctctcagctattcggaagaagcggctg
gaggaggcctcacttctacatcagttccaggcagatgccgatgacattgatgcctggatg
ctggacatcctcaagatagtctccagcaacgatgtgggccacgacgagtactccacacag
tctctggtgaaaaaacacaaggatgtggctgaggagatcaccaattacaggcccacaatc
gacacgctgcatgagcaagccagcgccctcccccaggctcacgcggagtctccagatgtg
aggggacggctggcgggcattgaagagcgctacaaggaagtggcagagctcacgcggctg
aggaagcaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggctgatgcc
tgtgagctctggattgatgagaaggagcagtggctcaataatatgcagatcccagagaaa
ctggaggacctagaagtcatccagcacaggtttgagagcctcgaaccagaaatgaacaac
caggcttcccgggttgctgtagtaaaccagattgcacgtcagctgatgcacagtggccat
cccagtgagaaggaaatcaaagcccaacaggacaaactcaatacaaggtggagtcagttc
agagaactggttgacaggaagaaggatgctcttctgtctgccctgagcatccaaaactat
catcttgagtgcaatgaaaccaaatcttggattcgagaaaagaccaaagttattgaatct
acccaggacctaggcaacgacctggctggagtcatggccctacagcggaagctgactggc
atggagcgagacttggttgccatcgaggcaaagctgagtgacctgcagaaggaggcagag
aagctggagtctgagcaccccgaccaggctcaggcaatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccaccctgaagaaccgagaggcctccctgggagaa
gccagcaagctgcagcagttcctacgggacttggatgacttccagtcgtggctctccagg
acccagacagccatcgcctctgaggacatgcccaacaccctgaccgaggcagagaagctt
ctcacacagcatgaaaatatcaaaaatgagatcgacaactatgaggaggactaccagaag
atgagggacatgggtgagatggtcacccagggacagactgatgcccagtacatgtttctg
cgccagcggctacaggccttggacactggctggaatgaactccacaaaatgtgggagaac
aggcaaaatctcctctcccagtcccacgcctaccagcagttcctgagggacacaaagcaa
gccgaagcctttcttaacaaccaggagtatgttttggctcatactgaaatgcccactacc
ctggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aacgaggagaagatcaatgctgttgtggagacaggccggaggttggtgagcgatggaaac
atcaattccgatcgcatccaagaaaaagtggactccattgatgacagacacaggaagaat
cgtgagtcagccagtgaacttctgatgagattgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaagagctttctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatctgcacagtaaatggctgaagcaccaagcatttatg
gcagaacttgcatctaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacggaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccactcagaccaaggcccagcggctctttgatgcaaac
aaggctgaactttttacccagagctgcgcagatctggataaatggctccatggcttggag
agtcagattcagtcggacgattatggcaaagaccttaccagcgtcaacatcctgctgaaa
aagcaacagatgctggagaaccagatggaagtacggaagaaggaaattgaggagcttcag
agccaggcccaagcgctgagtcaggaagggaagagcaccgatgaggtagacagcaagcgc
ctcactgtgcagaccaaattcatggagctgctcgaacccttgaatgaaaggaagcataat
ctgctggcctccaaagagatccatcagttcaacagagatgtggaggacgagatcttgtgg
gttggtgagaggatgcctttggcaacttccacagatcacggccacaacctccagactgtt
cagctgctaataaagaaaaaccagaccctccagaaagaaatccaggggcatcagcctcgc
attgatgacatctttgagagaagccaaaatatcgtcactgacagcagcagcctcaatgcg
gaggccatcagacagagactcgccgacctgaagcagctgtggggcctcctcatcgaggag
acggagaaacgccaccgacgccttgaggaggcacacaaggcccagcaatattactttgac
gccgctgaagcggaagcgtggatgagcgagcaggagctgtacatgatgtctgaggagaag
gccaaggatgagcagagtgctgtctccatgttgaagaaacaccaaattttagaacaagcc
gtggaagactatgcagagacagtacaccagctctccaagacaagccgggcattggtggct
gacagccatcctgaaagtgagcgcattagcatgcggcagtccaaagtagataagctatat
gctggcctgaaggaccttgctgaagagaggagaggcaagctagatgagaggcacaggcta
ttccagctcaaccgggaggtggatgacctagagcagtggattgctgagagggaggtggtc
gcaggatcccatgaactggggcaggactacgagcacgtcaccatgttgcaagaacgattc
cgggaatttgctcgagacacagggaacattggacaggaacgtgtggatacggtcaatcac
atggcagatgatctcatcaactctggacactcagatgctgccaccatcgctgaatggaag
gatggccttaatgaagcctgggctgatctgctggagctcattgacacgagaacacagatt
ctggctgcctcctatgaactgcataagttttatcatgatgccaaggaaatctttgggcgt
atccaagataaacacaagaaactccctgaggagcttgggagagatcagaacaccgtggag
accttacagcgaatgcacaccacctttgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaggatgcagctcgcctccaggcagcctatgcgggtgacaaggctgac
gacatccagaagcgtgagaacgaggtcctggaagcctggaagtcgctcctggacgcctgt
gagggccgcagggtgcggctggtggacacaggggacaagttccgcttcttcagcatggtg
cgggacctcatgctttggatggaggatgtcatccggcagatagaagcccaggagaagcca
agggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaatgacagtttcacaacctgtattgaacttgggaaatccctgctggctaga
aaacactatgcatctgaggagatcaaagaaaagttactacagttgacggaaaagagaaaa
gaaatgattgacaagtgggaagacagatgggaatggttaagactgattttggaggtccat
cagttctcaagggacgccagtgtggccgaggcttggctgcttggacaggagccctaccta
tccagccgcgaaatcggccagagtgtggatgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagcgacctgggacgagaggttctccgccctggaaaggctaaca
acattggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggcca
ccttctccagagccaagcacaaaggcttcggaggaggccgagtcccagcagcaatgggat
acttcaaaaggagagcaagtttcccagaatggtttgccggctgagcagggatcgccacgg
atgacagatacggtggacaccagtgaaatggtcaatggcgctgctgaacagaggacgagc
tccaaagagtccagtcctatcccctccccgacctctgaccgcaaggccaagactgcactc
ccagcccagagtgccgccaccctgcccgccaggacgcaggagacacccgcggcccagatg
gaaggcttcctaaaccggaagcacgagtgggaggcccacaacaagaaagcctcaagcagg
tcctggcacaatgtatattgtgtcataaataaccaagaaatgggtttctacaaagacgcc
aagaccgctgcttccggcatcccttaccacagcgaggtccctgtgagtttgaaggaagcc
gtctgtgaagtggcccttgactacaagaagaagaaacacgtgttcaagctcagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacgtggatccag
gccatctcctctgctatctcctctgacaaacatgacctgtctgccagcacccagagcaca
ccagcctcgagccgggcgcagaccttacccaccagcgtggtcaccatcaccagcgagtcc
agtcccggcaaacgggagaaggacaaagagaaagacaaagagaagcgcttcagccttttt
ggcaaaaagaagtga
DBGET
integrated database retrieval system
