Dipodomys ordii (Ord's kangaroo rat): 105987086
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Entry
105987086 CDS
T07834
Symbol
Hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105987086 (Hfm1)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105987086 (Hfm1)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Meiosis-specific proteins
Others
105987086 (Hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
105987086
NCBI-ProteinID:
XP_012873695
Ensembl:
ENSDORG00000014661
UniProt:
A0A1S3FBR2
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MLESDDYMYSVDNLLFRTPDEVENFPDNEKSLDWFLPPASLTTDIPDIQELEEEIESHKL
LGQEKRPQMLTSNLKITNDYADYVLPRQNMQFSLNKYEQDNLNSGRMDNSNLSHIAGKLT
YGSSQKYKSYMGIEMAPFEKNVLGEMELVNMAEDKGESTSAFRKRLFKICENVHENTYAS
DCAHLRYDLGSVKITQREVNKGKSRNCGNNNQKSQSSANMLPADGAFPSSEIGEDIFKLS
SFSIASQPHDIQGVTKNGLSSLKAVAEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNF
VICAPTGSGKTVVFELAITRLLMEAPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGPLGL
NCKELTGDTVMDDLFEIQHANIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKDE
NRGPTLEVVVSRMKTVQSLSQPLQNTITIIPMRFVAVSATIPNAEDIAEWLSDGERPAVC
LKMDESHRPVNLRKVVLGFPCSSNQTEFKFDLTLNYKISSVIRAYSDQKPTLVFCATRKG
VQQAASVLVKDTKFIITMEQKQRLQKYAYSVRDSKLKDTLIYGIAYHHAGMELSDRKVIE
GAFVTGDLRVLFTTSTLAMGVNLPAHLVIIKSTMHYAGGMFEEYSETDILQMIGRAGRPQ
FDTTATAVIMTRLSTRDKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITDVNIALEWI
RSTFLYIRALKNPSHYGFNSGLNKEGIEAKLQELCLKNLNDLSSLDLIKMDGDINFKPTE
SGRLMAWYYITFETVKKFCTISGKETLSDLVSMIASCNEFLDVQLRINEKKTLNTLNKSP
NRITIRFPMDGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRIARWLSDFV
AAQEKKFAVLLNSLILAKCFRCKLWENSLYVSKQLEKIGITLSNAMVNAGLTSFKKIEST
DARELELILSRHPPFGTQIKEAVMYLPKYELEVEQIARYSNTTAEILVTLTLRNFEQLQT
KRTAPDSHYTTLIIGDSDNQVVFKHKIMDSVLLKAGNWVKKIDVKRALISEDLSINLISS
DFVGLDIQQKFTVFYLGPKSFGSQVIKQKKSEADISHFEHPDRSAVTGACKGTTPCKKPG
NRECNHHCKNKHTCGHDCCKIGVAQKLEVKESAISSYLSDLRNRNAVSSLPPFKCLKLQM
NKSQSVDLKEFGFTPKPSISNRSRSENLSLPEWHVIEQKDQNEICGKVQQGPFEYQGKEV
LNVNFELGSEVWEDFDDENLIEVSSFLTDTKRTTTSGFGDPRSSSARGSELPLQKSKRKL
QNTVSNSFVSSYEKPYTYLSNRAMSDLGPSSMMQLPEQTGNTNTVSPHDRKQGLSPVFKR
LCFTQSKEIPNSANVKKVDFLIQNSESKKGTDFSYYHPVEAAGEMKSFLGIFDGIL
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatcagatgactacatgtattctgtggataatttgcttttcagaaccccagat
gaagttgaaaactttccagacaatgaaaaatcattggattggtttcttcctcctgcttca
ttgactactgatattccagatattcaggaattagaggaagaaatagaaagtcataaacta
ttaggtcaagaaaagagaccacaaatgttgacatcaaatttaaagattactaatgactat
gcagattatgtattaccaagacaaaacatgcaattttcccttaataaatatgaacaagat
aatctaaattcaggaagaatggataacagtaatttatcacatattgctggcaaactgact
tatggttcttctcagaaatataaaagttacatgggcattgaaatggcaccgtttgaaaaa
aatgttcttggtgaaatggaattagtcaatatggcagaagataaaggagaaagcacatca
gcatttcgaaaaagattatttaaaatttgtgaaaatgtgcatgaaaatacttatgccagt
gactgtgcacacttacgttatgatcttggctcagtgaaaattacccaaagagaagtgaac
aaggggaaatcaaggaactgtggaaataataaccagaagtctcaatcttctgcaaacatg
cttccagcagatggtgcttttccttcttctgaaattggagaagatatatttaaattatca
tctttttcaattgcatcccagcctcatgatattcaaggtgtgaccaaaaatggcttaagt
tctttgaaagctgttgcagaaatcccggcaaaatttagaagcattttcaaagagttccct
tacttcaattatatacagtccaaagcttttgatgatcttctttacacagatagaaatttt
gtgatttgtgctccaactggttctggaaaaactgtagtatttgaactagctatcacaaga
ttgcttatggaagcaccgttaccatggctaaacattaaaattgtttacatggcaccaata
aaagctctgtgtagtcaacgttttgatgactggaaggaaaaatttggaccattaggattg
aattgtaaagaactcactggagatacagtaatggatgacctatttgagattcagcatgcc
aatattattatgacaactccagaaaaatgggacagcatgactaggaaatggagagacaac
tctttggtccaactggttcggctatttctcattgatgaggtacatgttgtaaaagatgaa
aatcgtggtccaactcttgaagttgtagttagcagaatgaaaactgtacagtcattatct
cagcctttgcaaaataccatcactattattccaatgagatttgtggctgtatctgcaaca
attccaaatgctgaagatattgcagaatggctttcagatggtgaaagacctgctgtatgt
ctaaaaatggatgagagccacagacctgtgaaccttcggaaagtggtcctgggatttcct
tgcagtagtaaccagactgaatttaagtttgatttaacattaaactacaaaatttccagt
gttataagagcatactctgatcagaaaccgacacttgtgttttgtgcaacaaggaaaggt
gtacaacaggctgcttctgttcttgtgaaagatactaaatttattataactatggagcag
aaacaaaggttacagaagtatgcatattctgtgagagattcaaaactgaaagatacctta
atatatggtattgcttatcatcatgctgggatggaactgtcagatagaaaagtaattgaa
ggagcatttgttactggagatctacgagttctttttaccaccagtacattagctatggga
gtaaatttgcctgctcacttggtaattataaaatctacaatgcattatgctggaggaatg
tttgaagagtacagtgaaacagatattctacagatgattggtagagctggccgacctcag
tttgacactacagctactgcagttattatgactcggttaagtaccagagacaagtacatt
caaatgttagcttgtagtgacactatagaaagcagtttgcacagacatcttattgaacat
ttaaacgcagagatagtattacatactatcaccgatgtgaatattgcgttggaatggata
cgatcaacctttctttatatcagagccttgaaaaacccatctcattatggttttaattct
ggattgaacaaagaaggaattgaagcaaaattacaagaattatgtttaaaaaatcttaat
gacttgtcatccctggacttgataaagatggatggagatattaatttcaaaccaacagaa
tcaggaagattgatggcttggtattatattacatttgagacagtgaagaaattttgtaca
atcagtggaaaagaaactttatcagatctggtctcaatgatcgccagctgtaatgaattt
ctagatgtacagttaaggataaatgaaaagaaaacactgaatactttgaacaaaagtcca
aatcggataactattagatttccaatggacggaagaattaaaacaagagaaatgaaagta
aattgtcttatccaggcccagctaggatgcattcctatacaagattttgctttgacacaa
gatacctcgaagattttcagaaatggttcacgaattgcaagatggctgtcagattttgta
gctgctcaagaaaagaagtttgctgtgctattgaacagtctgattttagctaaatgtttt
agatgtaaactttgggagaactctctgtatgtatccaagcaactggaaaaaattggtata
acattgtcaaatgccatggtaaatgcaggtttgacttcctttaaaaaaattgaatcaaca
gatgcaagagaacttgagctgattttaagtagacaccctccttttggaactcaaataaaa
gaagctgtgatgtatcttccaaagtatgaacttgaagtagaacagattgcaagatacagt
aataccacggcggaaatattagtgacacttacgttaagaaactttgaacaactacaaact
aaacgaacagcaccagattctcactataccaccttaatcataggtgattcagacaatcag
gtcgtttttaaacacaaaattatggattctgttttgctaaaagctggaaactgggttaaa
aaaattgatgtgaagagagctcttatatccgaagatcttagcataaatctaattagctct
gattttgttggacttgatattcagcaaaagtttacagtcttttatttaggacccaagagc
tttggaagtcaagtaattaagcaaaaaaaatcagaagcagatatttcccattttgaacat
ccagataggtctgctgtaacaggagcttgtaaaggaacaactccctgcaaaaaacctggg
aaccgagaatgcaatcatcactgcaaaaataaacatacatgtggacatgactgctgtaaa
attggggttgcacagaagttagaagttaaagagtcagcaatttcttcatatttatctgac
ttaaggaacaggaatgctgtttcatctcttcctccatttaaatgtctcaagctacagatg
aataaatctcaaagtgtggatctcaaagagtttggttttactccaaaaccttctatatcc
aatagatcaaggtctgaaaatttaagcttacctgaatggcatgtaattgagcagaaggat
cagaatgaaatctgtggaaaagttcaacagggaccatttgaatatcagggcaaagaagtt
ttgaatgtgaactttgaattgggaagtgaagtttgggaagattttgatgatgaaaactta
atcgaagtcagtagttttttaactgatactaagaggacaacaacatcaggctttggagac
ccccggagttcaagtgccaggggaagtgagctacccctccaaaagtcaaagagaaaatta
caaaacacagtgtccaacagttttgtttcatcatatgagaagccatatacttatttatca
aaccgtgctatgtctgacttgggtccatcctccatgatgcaattgccagaacagaccgga
aatacaaatactgtttcccctcatgacagaaaacaaggcctgtcaccagtgttcaagagg
ctgtgctttactcagtccaaagaaataccaaattctgctaatgttaagaaagtcgacttc
ttgatacaaaatagtgaatctaaaaagggaacggatttcagttattatcatcctgtcgaa
gcagctggagaaatgaagagttttctgggaatatttgatggcattttgtaa
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integrated database retrieval system
