Dipodomys ordii (Ord's kangaroo rat): 105987116
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Entry
105987116 CDS
T07834
Symbol
Fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105987116 (Fubp1)
03041 Spliceosome [BR:
dord03041
]
105987116 (Fubp1)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105987116 (Fubp1)
Spliceosome [BR:
dord03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105987116 (Fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
105987116
NCBI-ProteinID:
XP_012873729
Ensembl:
ENSDORG00000016534
UniProt:
A0A1S3FCF2
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
GGQKRPLEDGDQPDAKKVAPQNDSFGTQMPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGE
QISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD
GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP
YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI
QNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGR
GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD
PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGAPM
GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYY
AHYYQQQAQPPPAAPAGAPTTTQTNGQGNYGDQQNPAPAGQVDYTKAWEEYYKKMGQAVP
APTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKSNS
AEDAASTKS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcagactactcgacggtgcctccaccctcctccggctcggctggcggcggcggcggg
ggcggcggcggcggcggcgtgaacgatgctttcaaagatgcgttgcagcgagcccggcag
attgctgcaaaaattgggggtgatgctggtacatcattaaattcaaatgactatggctat
ggaggacaaaaaagacctttagaagatggagatcaaccagatgctaagaaagttgcccct
caaaatgactcttttggaacacagatgccaccaatgcatcaacagcaaagatctgtaatg
acagaagaatacaaagttccagatggaatggttggatttataattggcagaggaggtgaa
cagatctcacgcatacagcaagaatctggatgcaaaatacagatagctcctgacagtggt
ggcctaccagaaaggtcttgtatgttaactggaacacctgaatctgtccagtcagcaaaa
cgattattggaccagattgttgagaaaggaagaccagcccctggctttcatcatggtgat
ggacctggaaatgcagttcaagaaatcatgattccagctagcaaggcaggattagttatt
ggaaaagggggagagactattaaacaacttcaggaacgggctggagttaaaatggttatg
attcaggatggacctcagaacactggtgctgacaaaccgcttaggattacaggcgaccca
tataaagttcaacaagccaaggaaatggtgttagagttaattcgtgatcaaggtggtttc
agagaagttcggaatgagtacgggtcaagaattggagggaatgaagggatagatgtcccc
attccaaggtttgctgttggcattgtaattggaagaaatggagagatgatcaaaaaaata
caaaatgatgctggtgttcgaattcagtttaaaccagatgatggaacaacacctgataga
atagcacaaattacaggacctccagaccgttgccagcatgctgcagaaattattacagac
cttcttcgaagtgttcaggctggtaatcctggtggacctggacctggtggtcgaggaaga
ggtagaggtcaaggcaactggaatatgggaccacctggtggactacaggaatttaatttt
atcgtgccaactggaaaaactggattaataataggaaaaggtggtgaaaccataaaaagt
ataagtcaacagtctggtgcaagaatagaacttcagagaaatcctccacctaatgcagat
cctaatatgaaattattcacaattcgtggcactccacaacaaatagactatgctcgtcaa
ctcatagaggaaaagattggtggcccagtaaatcctttagggccacctgtaccccacggg
ccccatggtgtcccaggcccccatgggcctcctgggccaccagggcctggagctccaatg
ggaccatacaaccctgcaccttataatccaggaccacctggcccagctcctcatggtcct
ccagccccgtatgctccccagggatggggaaatgcatatccacattggcaacaacaggct
cctcctgatccagctaaaacaggaacggatccaaattcagcagcttgggctgcttattat
gctcactattaccaacaacaagcacagccaccacctgcagctcctgcgggtgcaccaaca
acaacccaaactaatggacaaggtaactatggagatcagcagaatccagctccagctgga
caggttgattacaccaaggcttgggaagagtactacaagaaaatgggtcaagcagttcct
gctcctactggtgctccaccaggtggtcagccagattatagtgcagcctgggcagagtat
tatagacagcaagcagcctactatgcccagacaagtccccagggaatgccacagcatcct
ccagcacctcagtgccttcccagaccttccaccttaggttctgctgcaaaaagcaacagt
gctgaagatgctgcaagcaccaaatcatag
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integrated database retrieval system
