KEGG   Dipodomys ordii (Ord's kangaroo rat): 105987138
Entry
105987138         CDS       T07834                                 
Symbol
Rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03013  Nucleocytoplasmic transport
dord03015  mRNA surveillance pathway
dord03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105987138 (Rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    105987138 (Rbm8a)
   03015 mRNA surveillance pathway
    105987138 (Rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dord03019]
    105987138 (Rbm8a)
   03041 Spliceosome [BR:dord03041]
    105987138 (Rbm8a)
Messenger RNA biogenesis [BR:dord03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105987138 (Rbm8a)
Spliceosome [BR:dord03041]
 Complex C
  Other components
   EJC/TREX
    105987138 (Rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 105987138
NCBI-ProteinID: XP_012873775
Ensembl: ENSDORG00000027340
UniProt: A0A1S3FBZ6
LinkDB
Position
Unknown
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtactggaccttcacgaggctgggggcgaggatttcgccatggatgaggat
ggggacgagagcatccacaaactgaaagaaaaggcgaagaaacggaagggccgcggcttt
ggctcggaagaggggtcccgggcgcgtatgcgcgaggattacgacagcgtggaacaggac
ggagatgaacccggaccgcagcgctctgttgaaggctggattctctttgtcactggagta
catgaagaagccactgaagaagacatccacgacaaattcgccgaatatggggaaataaaa
aatatccacctcaacttagacaggcggacaggatacctaaaggggtatactctagttgaa
tatgaaacatacaaagaggcccaggctgccatggagggactcaatggccaggatttgatg
ggacagccaatcagcgtggactggtgttttgttcggggtccacccaagggcaagaggaga
ggtggccggagacggagcaggagtccagaccggagacgacgctga

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