Dipodomys ordii (Ord's kangaroo rat): 105987199
Help
Entry
105987199 CDS
T07834
Symbol
Smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105987199 (Smc5)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105987199 (Smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_13
AAA_21
Med9
AAA_29
FtsK_SpoIIIE
CCDC39
AAA_25
Motif
Other DBs
NCBI-GeneID:
105987199
NCBI-ProteinID:
XP_012873852
Ensembl:
ENSDORG00000009689
UniProt:
A0A1S3FD04
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MATPSRKTTTPSPLASKRPLSTDLSSEIPSKRKNSTPPLSLLPSSGSFVEGSIVRIAMEN
FLTYDVCEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSK
GMVEIELFRTSGNLIITREIDVTKNQSFWFINKRSTTQKVVEEQVAALNIQVGNLCQFLP
QDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLEKMV
QRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGVKLARDQVKEEVRKLK
EGQIPITNRIQEIERERHNMEALIKGKATNIKETSQKCKQKQEFIERKDKNIEDLQQELI
VKQNAEHDLQRRISNARKMIEDLQNELKTAENCENLQPQIDAITNDLRRIQDEKGLCEGE
IIDKRRERETLEKEKQRDNMKDNKNAKYVENHIPSNDLRAFVFESQEDMEIFLKEVRDNK
KLRVNAVMAPRISYADKAPSRSLNELRIEVIKETRLRQIYTAEEKYVVKTSFYSNKVISS
NTSLKVAQFLTVTVDLEQRRHLEEQLKEINRKLQAVDSGLIALRDTNKHLEHKDNELRQK
KKELLDRKTKKRQLEQKLSSKLESIKLMEQDSCNLEEEERKTSTKIKELNVQKAKLVTEL
TNLVKICTSLHMQKVDLILQNTTMISEKNKLESDYVAASSKLRVTEQQFVELDENRLRLL
QKCKELMKRARQVCNLRAEQIVPQEYQTQVPTIPNGHNSSLPMAFQDLPNTLDEIDALLT
EERSRASCFTGLNPTVVEEYAKREKEIEQLTEELKKKRAELDTYRESISQVKERWLNPLK
ELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSG
GERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFIT
PKLLQNLPYSEKMTVLFVYNGPHMLEPNRWNLKAFQRRRRRITFTQPSQ
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccagccggaagacgacaacccccagccccctggcttccaagaggccgctc
tcgacagacctttcttcggagatcccgagcaagaggaagaactcgaccccgccgttgtcg
ctgctgccgtcatccgggtctttcgtggagggctccatcgtccgcatcgccatggagaac
ttcctaacatatgatgtctgtgaagtatctcctggaccccacttgaatatgattattgga
gctaatggaacaggaaagtcaagcatagtatgtgccatttgtcttggattagcaggcaaa
cctgctttcatgggacgggcagataaggttggattttttgtgaagagaggatgttccaaa
ggcatggttgaaattgaattgttcaggacttctggaaatcttataatcacccgagagatt
gatgtgacaaaaaatcagtccttttggtttatcaacaaaagatctacaactcagaaagta
gtagaagagcaagttgcagccttaaatattcaagtgggcaacctttgccagtttctacct
caggacaaagttggagaatttgctaaactcagcaaaattgaactccttgaagctactgag
aagtcaattggtcctccagaaatgcacaggtatcactgtgaactcaaaaacttcagggag
aaggaaaaacaactggagacctcatgcaaagagaaaactgaatacctagagaaaatggtt
cagagaaacgaaagatacaaacaagatgtggaaaggttctatgaacgtaagcgacattta
gatttaattgagatgcttgaggcaaaaagaccatgggtggaatatgaaaatgttcgtcag
gaatatgaaggagtaaaactagcccgtgatcaagtgaaggaagaagtcagaaaacttaaa
gaagggcagattcctatcacaaatcgaattcaagaaatcgaaagggaacgtcataatatg
gaggctctaatcaaaggaaaggcaacaaacattaaggagacatcacaaaaatgcaaacaa
aagcaagaatttattgaaaggaaagataaaaatattgaagatcttcaacaggagttaata
gtaaaacaaaatgcagagcatgatctacagaggagaataagcaatgcccgaaaaatgata
gaggatttgcaaaatgaattaaagactgctgaaaattgtgagaatcttcagcctcaaatt
gatgccattacaaatgatttgagacgaattcaggatgaaaagggattatgtgaaggcgag
attattgataaacgaagagagcgagagactctagagaaggagaaacagagggataatatg
aaagataataaaaatgccaaatatgttgaaaatcacattccgtctaatgacttgagagcc
tttgtttttgaaagtcaagaggatatggagattttcctcaaagaggttcgtgacaataaa
aaattaagagtaaatgctgttatggctcccaggatttcatatgcagacaaagcaccttcc
agatctctgaatgaactaaggatagaagtaataaaagaaactcgtttaagacaaatttac
acagcagaagaaaagtatgtggtgaaaacttctttttattcaaacaaagtgatttctagt
aacacatcccttaaagttgcccagttcctcacagttactgtagatctagagcaaagaaga
cacttggaagaacaactaaaggaaattaatagaaaattgcaagcagtggactcaggattg
attgctttgcgtgatacaaacaaacatctagaacacaaagacaatgaacttagacaaaag
aagaaggaacttcttgacagaaaaaccaagaagaggcaactggaacaaaaacttagttcc
aagctagaaagcataaaactgatggagcaggactcttgtaacctggaagaggaggaacga
aaaacaagtaccaaaatcaaagagttaaatgttcagaaagcaaaacttgttactgaatta
acaaacctagtaaagatttgtacttctttgcatatgcaaaaggtagatttaatccttcag
aatacgacaatgatttctgagaagaacaaattagagtcagattatgtagctgcatcttca
aaactacgtgtcacagagcaacagtttgttgagttggacgaaaacagactaagattatta
cagaaatgcaaagaacttatgaagcgagcgaggcaagtatgtaacctgcgcgcagagcag
attgttcctcaagaatatcagacacaagtgcccaccattccaaatggacacaactcctca
ctccccatggccttccaagatcttccaaacacattggatgaaattgatgctctattaaca
gaagaaagatcaagagcctcctgcttcacaggactaaatcctacagtagttgaagaatat
gcaaaaagagaaaaagaaatagagcagttaactgaggaactaaagaaaaaaagagctgaa
ctagatacatatagggaaagcatttcacaggtaaaagaaagatggcttaatcccttaaag
gagctagtagaaaaaattaatgaaaaattcagcaacttttttagttccatgcagtgtgct
ggtgaagttgatctccatacagaaaatgaggaagactatgataaatatggaattcgaatc
agagtcaaatttcgaagtagtactcaactgcacgaattgactcctcatcatcaaagtgga
ggcgaaagaagtgtttccaccatgttatacttgatggcacttcaggagcttaataggtgt
ccattcagagtagttgatgaaatcaatcagggtatggacccaatcaatgaacggagagtg
tttgaaatggttgtaaacacggcctgtaaagaaaacacatctcagtacttctttattaca
ccaaagctcctgcagaatcttccttactctgaaaaaatgacagtgttgtttgtctacaat
ggtcctcatatgctggaaccaaacaggtggaatttaaaggccttccaaaggcggagacgc
cgtatcacattcactcagccttctcaatga
DBGET
integrated database retrieval system
