Dipodomys ordii (Ord's kangaroo rat): 105987478
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Entry
105987478 CDS
T07834
Symbol
Cntn1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105987478 (Cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dord04515
]
105987478 (Cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dord00537
]
105987478 (Cntn1)
Cell adhesion molecules [BR:
dord04515
]
Immunoglobulin superfamily
Contactins
105987478 (Cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dord00537
]
Others
105987478 (Cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Sp38
C2-set_2
Motif
Other DBs
NCBI-GeneID:
105987478
NCBI-ProteinID:
XP_012874196
Ensembl:
ENSDORG00000004521
UniProt:
A0A1S3FCI5
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MKMWLLVGPLVLLSFTTCLAEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGK
VSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIP
TIRWLKNGYAYHKGELRLYDVTFDNAGMYQCIAENTYGAIYANAELKILALAPTFEFNPM
KKKLLAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRVLIWEDGSLEINNITRNDGG
VYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPSLDLTFVW
SFNGYVIDFNKENVHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE
GNMEAAKAVDLIPWMEYEFRVVATNTLGMGEPSLPSNRIKTDGAAPNVAPSDVGGGGGSN
RELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDESMSPSTAF
QVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESY
QIRYWAAHDKEAAAHRVQVPSQEYSARLENLLPDTQYFVEVGACNSAGCGPSSDVIETFT
KKAPPSQPPRIISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKH
SIELPIPRDGEYVVEVRAHSDGGDGVVSQVKISGAPTLSSGFLGLLLPALGILVYLEF
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggttgctggtcggtcctcttgttttattatcttttacaacttgtctagca
gagtttacgtggcacagaaggtacggtcatggagtttctgaggaagacaagggatttggc
ccgatctttgaagagcaaccaatcaataccatttatccagaagaatctctggaaggaaaa
gtctcactcaattgcagggcaagggccagcccttttccagtttacaagtggagaatgaat
aatggggatgtggatctgacaagtgaccggtacagcatggtgggggggaacctcgttatc
aacaaccctgataagcagaaagacgctggcatatattattgcttggcctccaataactac
gggatggtgcggagcacagaggcaacactgagctttgggtatcttgatcctttcccgcct
gaagagcgtcctgaggtcaaagtgaaagaagggaagggaatggttctcctctgtgatcct
ccctaccattttccagatgatcttagctatcgctggctcttaaatgaatttcctgtcttt
atcacaatggacaaacgaagatttgtgtctcagacaaatggcaacctctacattgcaaac
gttgaggcttctgacagaggcaattattcctgctttgtatccagtccttctattaccaag
agtgtgttcagcaaatttatcccactcattccaatccctgaacgaacaacaaaaccatac
ccagctgatatcgtagtacagttcaaggacatatatgcactaatgggtcaaaatgtgact
ctagagtgttttgcacttggaaatcctgttcctgatatccgatggaggaaggtgctagaa
ccaatgcctagcactgctgagattagcacctcgggagctgtcctgaagatcttcaatatc
cagctagaagatgaaggcatttatgaatgtgaggctgagaatattagagggaaggataaa
caccaggcaagaatttatgttcaagcgtttccagaatgggtagaacatatcaatgacaca
gaggttgacataggcagtgatctctactggccttgcatagctaccggaaaacccatccct
accatccgctggctgaaaaatggatatgcgtatcataaaggggagctgcgactctacgat
gtgacttttgacaatgctggcatgtatcagtgcattgcagaaaacacttatggagccatc
tacgccaatgctgagctgaagattctggctttggctccaacttttgaattcaatccaatg
aagaagaagcttctggctgctaaaggaggaagggtgatcattgagtgtaagcccaaagct
gcaccaaaacctaagttttcctggagcaaaggaacagaatggcttgtcaacagcagtaga
gtactgatttgggaagatgggagcttggaaatcaataacattacaaggaatgatggcggt
gtctacacgtgcttcgcagagaataacagagggaaagctaacagcaccggcacccttgta
atcacagatcccacccggatcatcctggctcccattaacgctgatatcacggttggagag
aatgccaccatgcagtgcgcagcgtccttcgaccccagcctcgacctcaccttcgtgtgg
tccttcaacggttatgtgattgatttcaacaaggagaatgtgcactaccagaggaacttt
atgctggatgccaacggggaactcctcatccgaaatgcccagctcaaacatgcaggaaga
tacacatgcaccgcccagacaattgtagacaattcttcagcctcagctgaccttgttgtg
cgaggtcccccaggtcccccaggtggtctgagaatagaagacatcagagccacttctgtg
gcacttacttggagccgtggttcagacaatcacagtcctatctctaagtacactatccag
acaaagaccattctttcagatgactggaaagatgcaaaaacagatcccccaattattgaa
ggaaacatggaggccgcaaaagcagtggatttaatcccatggatggagtatgaatttcgt
gtggtagcaaccaatacattgggcatgggagagcccagtttaccatcaaacagaattaaa
acagatggtgctgcacccaatgtggctccatctgatgtaggcggtgggggtggaagcaac
agagaactgaccattacctgggcgcccttgtcaagagaataccattatggcaacaatttt
ggttacatcgtggcatttaagccatttgatggagaagaatggaaaaaagtgacagttact
aatccagacactggcagatacgtccataaggatgaatccatgagcccttctactgccttt
caagtaaaagttaaagccttcaacaacaaaggagatgggccgtacagcctcatagctgtc
attaactcagcacaggatgctcccagtgaagcccctacggaagtcggtgtcaaagtctta
tcctcttctgagatttcagttcactggaagcatgttttagaaaaaatagtagaaagctac
cagattcgctattgggcagcccatgacaaggaagcagcagcacaccgggttcaagtcccc
agccaggagtattcagccaggctggagaacctcctgcccgacactcagtactttgtggaa
gtcggagcctgcaacagtgctgggtgtggaccttcaagtgatgtgattgagaccttcacc
aagaaagcacctcccagccagccaccaaggatcataagttccataaggtctggttcacgt
tacatcatcacctgggaccacgtggttgcactgtccaatgagtctactgtgacaggatac
aaggtcctctacaggcctgacgggcagcatgacggcaagctgtactccacgcacaagcac
tccatcgagttgcccatcccccgcgatggagagtacgtggtggaggttcgagcacacagt
gacgggggagatggagttgtgtctcaagtaaaaatttcaggtgcacccaccctgtcttca
ggctttcttggcttactgctgcctgccctgggcatccttgtgtacttggaattctga
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