Dipodomys ordii (Ord's kangaroo rat): 105987549
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Entry
105987549 CDS
T07834
Symbol
Smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03082
ATP-dependent chromatin remodeling
dord04714
Thermogenesis
dord05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105987549 (Smarcd1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105987549 (Smarcd1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105987549 (Smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105987549 (Smarcd1)
03036 Chromosome and associated proteins [BR:
dord03036
]
105987549 (Smarcd1)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105987549 (Smarcd1)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105987549 (Smarcd1)
PBAF complex
105987549 (Smarcd1)
GBAF(ncBAF) complex
105987549 (Smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
105987549
NCBI-ProteinID:
XP_012874283
Ensembl:
ENSDORG00000003677
UniProt:
A0A1S3FCF0
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggcaccgagcggcggggccggagcctcagga
ggggcgggcgcggcagctgctctgggcccgggcggaactcccgggcctccggtgagaatg
ggtccggcgccgggtcaggggctgtaccgttccccgatgcccggggcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggacctcctggc
tatggggggaacccttcagtccgacctggcctggctcagtccgggatggaccagtcccgc
aagagacctgcacctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggacctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcctatcaagcaaaaacgg
aagcttcgtattttcatttctaacactttcaatccggccaagtcagatgccgaagatggg
gaagggaccgtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttttcttccttttttaagtccttg
gtgattgaattagacaaagacctgtatggaccagacaaccatctggtagaatggcacagg
accgccactacccaggagactgatggcttccaggtgaagcggccaggagatgtgaatgta
cggtgtactgtcctactgatgctggattaccagcctccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccatacacaaactcgtccagtgatcatccaagcactctgg
cagtatatcaagacacataagctccaggaccctcatgaacgagaatttgttatctgtgac
aagtacctccaacagatctttgaatctcaacgtatgaagttttcagagatccctcaacgg
cttcatgccttgcttatgccaccagaacccatcattattaaccatgtcatcagtgttgac
ccaaatgaccagaaaaagacagcttgttatgatattgatgtggaagtagatgatactttg
aagacccagatgaattcttttctgctgtctactgccagtcaacaggagatcgctactcta
gacaacaagatccatgagactatagaaactatcaaccagctgaagacccaacgggagttc
atgctgagttttgccagagaccctcaaggtttcatcaatgactggcttcagtcccagtgc
cgggacctcaagaccatgactgatgtggtgggtaacccagaggaggagcgccgtgctgag
ttctacttccaaccttgggcgcaggaggctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccttgggaatccggaatacctag
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integrated database retrieval system
